RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 GPR61Q9BZJ8 451 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 KLK11Q9UBX7 282 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PLXNB3Q9ULL4 1909 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 A0A1B0GTL3 188 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 HBZP02008 142 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SFTA3P0C7M3 94 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SMIM6P0DI80 62 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 CDAP32320 146 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 C19orf57Q0VDD7 668 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PCOLCEQ15113 449 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PRSS27Q9BQR3 290 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 GAB2Q9UQC2 676 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 MRPS16Q9Y3D3 137 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 DNASE2O00115 360 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SLC22A18ASQ8N1D0 253 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PMCHL2Q9BQD1 86 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ZMAT3Q9HA38 289 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 FLVCR2Q9UPI3 526 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 V9GYH0 126 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 WNK2Q9Y3S1 2297 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 IGKV1-8A0A0C4DH67 115 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF716A6NP11 495 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 GNG7O60262 68 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 VENTXO95231 258 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 NKX2-5P52952 324 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SSX9Q7RTT3 188 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OR5M9Q8NGP3 310 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 WDR13Q9H1Z4 485 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 DCTN6O00399 190 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 LINC00271P0C7V0 271 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 RPL7P18124 248 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 BCL3P20749 454 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 MAGEA5P43359 124 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 LTC4SQ16873 150 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 C10orf113Q5VZT2 155 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OR2I1PQ8NGU4 316 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 DTD1Q8TEA8 209 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF775Q96BV0 537 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SRSF8Q9BRL6 282 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 COL25A1Q9BXS0 654 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 HIGD1AQ9Y241 93 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 MFSD2BA6NFX1 497 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM250H0YL14 139 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SPRY1O43609 319 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 HLA-DQA1P01909 254 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OR9G1Q8NH87 305 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 PGLYRP3Q96LB9 341 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 RHNO1Q9BSD3 238 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SLC25A33Q9BSK2 321 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OSGIN2Q9Y236 505 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 DENND4AQ7Z401 1863 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF106Q9H2Y7 1883 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM238LA0A1B0GVL6 79 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 A6NJY4 79 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 GATCO43716 136 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SLC25A5P05141 298 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 MPV17P39210 176 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CA7P43166 264 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CRIPAKQ8N1N5 446 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 RNASEH2CQ8TDP1 164 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM191AQ9H0A3 160 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SLC7A10Q9NS82 523 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 HYPMO75409 117 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CCL1P22362 96 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 FAM71F2Q6NXP2 309 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 LINC00114Q6XXX2 140 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OR2T10Q8NGZ9 312 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 ACY3Q96HD9 319 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 HARBI1Q96MB7 349 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 C1QTNF5Q9BXJ0 243 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.74□□□□□ -1.813e-10■■■■□ 21.5
VPS13C-202ENST00000261517 SPTBN4Q9H254 2564 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 FCGR3AP08637 254 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OR52B4Q8NGK2 314 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 GALNT14Q96FL9 552 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 IGHV3-15A0A0B4J1V0 119 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CDRT15L2A8MXV6 281 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 EFSO43281 561 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 KLF4O43474 513 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 NDUFS6O75380 124 aaKnown RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 HSBP1O75506 76 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 APOBEC3AP31941 199 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 OR3A1P47881 315 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 P2RX3P56373 397 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CLEC18BQ6UXF7 455 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 MYPOPQ86VE0 399 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM251Q8N6I4 163 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 FAAP24Q9BTP7 215 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 IGKV3D-15A0A087WSY6 115 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CCL21O00585 134 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 FMODQ06828 376 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF816Q0VGE8 651 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-202ENST00000261517 CBLN3Q6UW01 205 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 FAM206AQ9NX38 181 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 MYO7BQ6PIF6 2116 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 KMT2EQ8IZD2 1858 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 A6NIN4 97 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 WNT1P04628 370 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 FNDC7Q5VTL7 733 aa3.74□□□□□ -1.81
VPS13C-202ENST00000261517 SPINK14Q6IE38 97 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms