RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 UBE2NP61088 152 aaKnown RBP16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 HLA-DRB3P79483 266 aa16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 PNRC1Q12796 327 aaPredicted RBP16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 OR5I1Q13606 314 aa16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 MRGPRGQ86SM5 289 aa16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 SRD5A3Q9H8P0 318 aa16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 KIAA1456Q9P272 454 aa16.13■□□□□ 0.17
COL4A3BP-201ENST00000261415 HIVEP3Q5T1R4 2406 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 A0A1W2PR80 420 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 H3BSH0 61 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 CIDEAO60543 219 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 ETFRF1Q6IPR1 90 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 FAM57BQ71RH2 274 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 MDP1Q86V88 176 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 OR8B12Q8NGG6 310 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 RNASE8Q8TDE3 154 aaKnown RBP16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 DNAJC4Q9NNZ3 241 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 XKRY2A2RUG3 117 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 ISG15P05161 165 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 IRF2P14316 349 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 HOXC12P31275 282 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 COL5A1-AS1Q5SY13 56 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 BHLHA15Q7RTS1 189 aaPredicted RBP16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 SMIM15Q7Z3B0 74 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 C17orf78Q8N4C9 275 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 FAM213BQ8TBF2 198 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 NKX3-1Q99801 234 aaPredicted RBP16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 ZNF319Q9P2F9 582 aa16.12■□□□□ 0.17
COL4A3BP-201ENST00000261415 K7EP13 123 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 K7N7A8 449 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 CCL21O00585 134 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 RAC2P15153 192 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 FPR2P25090 351 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 OR10J1P30954 320 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 RND3P61587 244 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 MRPL41Q8IXM3 137 aaKnown RBP16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 ZFYVE26Q68DK2 2539 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 LOC107986453A0A1B0GWG9 222 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 C20orf202A1L168 122 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 P2RY10O00398 339 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 SUPT4H1P63272 117 aaKnown RBP16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 PLP2Q04941 152 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 VAX1Q5SQQ9 334 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 NKAIN3Q8N8D7 197 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 WDR31Q8NA23 367 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 FAM46BQ96A09 425 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 HIST1H2AAQ96QV6 131 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 DHDHQ9UQ10 334 aa16.11■□□□□ 0.17
COL4A3BP-201ENST00000261415 NXPH2O95156 264 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 CYB5R3P00387 301 aaPredicted RBP16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 FSTP19883 344 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 TMEM241Q24JQ0 296 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 IAH1Q2TAA2 248 aaPredicted RBP16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 PGAM5Q96HS1 289 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 MSL2Q9HCI7 577 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 C1orf123Q9NWV4 160 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 JKAMPQ9P055 326 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 HHLA2Q9UM44 414 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 WSB1Q9Y6I7 421 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 C5orf63A6NC05 138 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 E5RGE8 158 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 CEBPGP53567 150 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 KLF3P57682 345 aaPredicted RBP16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 GPR157Q5UAW9 335 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 SGPP2Q8IWX5 399 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 CHST4Q8NCG5 386 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 OR51E1Q8TCB6 317 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 MRGPRDQ8TDS7 321 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 ERGIC1Q969X5 290 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 FKBP11Q9NYL4 201 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 NSG2Q9Y328 171 aa16.1■□□□□ 0.17
COL4A3BP-201ENST00000261415 C1QL1O75973 258 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 SCGB1D1O95968 90 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 CCL2P13500 99 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 FUT3P21217 361 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 TAF9Q16594 264 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 SNAI3Q3KNW1 292 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 MIEN1Q9BRT3 115 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 ZNF2Q9BSG1 426 aaPredicted RBP16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 CABLES2Q9BTV7 478 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 CTDSP1Q9GZU7 261 aa16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 POLR3KQ9Y2Y1 108 aaPredicted RBP16.09■□□□□ 0.17
COL4A3BP-201ENST00000261415 C5orf49A4QMS7 147 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 HPRT1P00492 218 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 SELENOTP62341 195 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 COL10A1Q03692 680 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 SPOCK1Q08629 439 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 C1orf100Q5SVJ3 147 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 POM121L2Q96KW2 1035 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 NUDT16L1Q9BRJ7 211 aaKnown RBP16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 OR2J1Q9GZK6 312 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 OBP2BQ9NPH6 170 aa16.08■□□□□ 0.17
COL4A3BP-201ENST00000261415 HSBP1L1C9JCN9 74 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 LCATP04180 440 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 IGFBP3P17936 291 aaPredicted RBP16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 CCNOP22674 350 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 FAM27E3Q08E93 113 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 PMS2P11Q13670 270 aa16.08■□□□□ 0.16
COL4A3BP-201ENST00000261415 SLC22A6Q4U2R8 563 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms