RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 G6PCP35575 357 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 PSMB3P49720 205 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 PMS2CLQ68D20 193 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 CDH20Q9HBT6 801 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 SIRT7Q9NRC8 400 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 CLN8Q9UBY8 286 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 PRSS50Q9UI38 385 aa13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 COL5A1P20908 1838 aaPredicted RBP13.77□□□□□ -0.2
SNCAIP-202ENST00000261368 ZNF503-AS2A6NEH8 195 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 DEFA4P12838 97 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 PMELP40967 661 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 GABRA2P47869 451 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 PAX9P55771 341 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 ARL16Q0P5N6 197 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 ABLIM2Q6H8Q1 611 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 LIN7CQ9NUP9 197 aaKnown RBP13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 EP300Q09472 2414 aaPredicted RBP13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 IGHV3-43A0A0B4J1X8 118 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 DEFB108AA8MXU0 73 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 PPP5D1E7EU14 171 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 IGHV3-43DP0DP04 118 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 MALSU1Q96EH3 234 aa13.77□□□□□ -0.21
SNCAIP-202ENST00000261368 TRAV24A0A0B4J272 114 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 IGHV3-13P01766 116 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 IGHV3-7P01780 117 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 OR1C1Q15619 314 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 ZNF66Q6ZN08 573 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 WASF3Q9UPY6 502 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 SERPINA7P05543 415 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 CD55P08174 381 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 HNF1AP20823 631 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 FGF7P21781 194 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 ARR3P36575 388 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 RTP5Q14D33 572 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 NUFIP2Q7Z417 695 aaKnown RBP13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 TPRX1Q8N7U7 411 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 VAX2Q9UIW0 290 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 TINAGQ9UJW2 476 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 DMRT1Q9Y5R6 373 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 IGHV2-70P01814 119 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 OR3A1P47881 315 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 UBE2NP61088 152 aaKnown RBP13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 OR2M7Q8NG81 312 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 OR2D2Q9H210 308 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 TMEM9BQ9NQ34 198 aa13.76□□□□□ -0.21
SNCAIP-202ENST00000261368 DUXBA0A1W2PPF3 345 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 CER1O95813 267 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 IGHEP01854 428 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 GCNT2Q8N0V5 402 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 CHD3Q12873 2000 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 CHRNA7P36544 502 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 ARG2P78540 354 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 OR8G1Q15617 311 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 TMEM241Q24JQ0 296 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 C16orf82Q7Z2V1 217 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 MED12LQ86YW9 2145 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 OR13D1Q8NGV5 346 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM173AQ9BQD7 235 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 FZR1Q9UM11 496 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 PPIHO43447 177 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 CYB5R3P00387 301 aaPredicted RBP13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 TFF1P04155 84 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 HOXA4Q00056 320 aaPredicted RBP13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 EDDM3AQ14507 147 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 Q6ZSR3 168 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 WFIKKN1Q96NZ8 548 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 RTL8AQ9BWD3 113 aa13.75□□□□□ -0.21
SNCAIP-202ENST00000261368 CADP27708 2225 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A10PA6NDY2 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A18PA6NE21 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A16PA6NEW6 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A20PA6NIJ5 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A8PA6NJQ4 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A7PA6NKC0 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A22PA8MWA6 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A12PA8MX19 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A5PA8MXJ8 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A23PA8MXZ1 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 MT-CO3P00414 261 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 IFNA10P01566 189 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A15PP0C7V4 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A13PP0C7W8 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A14PP0C7W9 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FAM90A24PP0C7X0 464 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 EGR1P18146 543 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FFAR4Q5NUL3 377 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 TIPARPQ7Z3E1 657 aaKnown RBP13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 FGFRL1Q8N441 504 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 PLPPR1Q8TBJ4 325 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 WDFY4Q6ZS81 3184 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 PTBP3O95758 552 aaKnown RBP13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 OR2H2O95918 312 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 BSXQ3C1V8 233 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 ZNF525Q8N782 197 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 TREM2Q9NZC2 230 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 GALR1P47211 349 aa13.74□□□□□ -0.21
SNCAIP-202ENST00000261368 MSMO1Q15800 293 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms