RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ASAH2BP0C7U1 165 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 MYOZ3Q8TDC0 251 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 PRSS27Q9BQR3 290 aa10.49□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 CTSBP07858 339 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 PAFAH1B2P68402 229 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 CEACAM21Q3KPI0 293 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 NFAM1Q8NET5 270 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 GPHA2Q96T91 129 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 DHRS7CA6NNS2 312 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 PGA4P0DJD7 388 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 MMP9P14780 707 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 GABRA6Q16445 453 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 MRPL30Q8TCC3 161 aaKnown RBP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 RTN4RQ9BZR6 473 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 COX6B1P14854 86 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 NUBP1P53384 320 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF383Q8NA42 475 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 AMELYQ99218 206 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 OR5AC2Q9NZP5 309 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 ELOA3CA0A087WX78 387 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 VSIG10L2P0DP72 767 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF250P15622 560 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 MEOX2P50222 304 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 GFRA1P56159 465 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
COL8A1-201ENST00000261037 SNAI3Q3KNW1 292 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 KRTCAP3Q53RY4 240 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 OR5AU1Q8NGC0 362 aa10.48□□□□□ -0.73
COL8A1-201ENST00000261037 IGHV3OR16-10A0A075B7F0 116 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 A0A1W2PPC1 479 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 EPOPA6NHQ4 379 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 SIGLEC5O15389 551 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 DCAF12L2Q5VW00 463 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 SSX8Q7RTT4 187 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 TBX15Q96SF7 602 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 PRDM14Q9GZV8 571 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 ERVFRD-1P60508 538 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-201ENST00000261037 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CEACAM18A8MTB9 384 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CORTO00230 105 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 HPRT1P00492 218 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 LY6EQ16553 131 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 VN1R17PQ8TDU5 208 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 WFDC6Q9BQY6 131 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 PXMP4Q9Y6I8 212 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 PF4V1P10720 104 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 GCSHP23434 173 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 DLX1P56177 255 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 TGIF1Q15583 401 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CLPPQ16740 277 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-201ENST00000261037 MRGPRGQ86SM5 289 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 ZBTB34Q8NCN2 500 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 RSG1Q9BU20 258 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CTXND1A0A1B0GTU2 59 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 EIF3GO75821 320 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL8A1-201ENST00000261037 OR10J1P30954 320 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CD81P60033 236 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 ZP4Q12836 540 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 CLEC2AQ6UVW9 174 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 C16orf92Q96LL3 132 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 RBKSQ9H477 322 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 KCNK7Q9Y2U2 307 aa10.47□□□□□ -0.73
COL8A1-201ENST00000261037 HAX1O00165 279 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 SLC25A53Q5H9E4 307 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 FAM214BQ7L5A3 538 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 ISLRO14498 428 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 TSPAN2O60636 221 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 DEDDO75618 318 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 REG1AP05451 166 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 CDCP2Q5VXM1 449 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 C19orf48Q6RUI8 117 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF645Q8N7E2 425 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 PTX4Q96A99 478 aa10.46□□□□□ -0.73
COL8A1-201ENST00000261037 HYPMO75409 117 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 SUCLG1P53597 346 aaKnown RBP10.46□□□□□ -0.74
COL8A1-201ENST00000261037 FUT5Q11128 374 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.74
COL8A1-201ENST00000261037 ELOVL1Q9BW60 279 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 TMEM189A5PLL7 270 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 M0R3E3 92 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 ACAA1P09110 424 aaPredicted RBP10.46□□□□□ -0.74
COL8A1-201ENST00000261037 NMUP48645 174 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 MMP16P51512 607 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 FAM27BQ5VT28 67 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 CCDC144NLQ6NUI1 221 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF738Q8NE65 137 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 SRXN1Q9BYN0 137 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 CISD1Q9NZ45 108 aaKnown RBP10.46□□□□□ -0.74
COL8A1-201ENST00000261037 HSPB8Q9UJY1 196 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 PAM16Q9Y3D7 125 aa10.46□□□□□ -0.74
COL8A1-201ENST00000261037 IGKV3D-11A0A0A0MRZ8 115 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 B4E171 279 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 C4orf51C9J302 202 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms