RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 RAB12Q6IQ22 244 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 GLIPR1L1Q6UWM5 242 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 OSR2Q8N2R0 312 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 CHST4Q8NCG5 386 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 OR5M8Q8NGP6 311 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 IGHV3OR16-10A0A075B7F0 116 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 M0R1W7 72 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 ZNF735P0CB33 412 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 ATF4P18848 351 aaPredicted RBP13.76□□□□□ -0.21
SDCBP-201ENST00000260130 SERPINA2P20848 420 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 EDDM3BP56851 147 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 SLC22A6Q4U2R8 563 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 GPR157Q5UAW9 335 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 AWAT2Q6E213 333 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 Q8N7P7 452 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 OR4S1Q8NGB4 309 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 OR4D6Q8NGJ1 314 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 C22orf15Q8WYQ4 148 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 PRRT1Q99946 306 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 ST3GAL6Q9Y274 331 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 TRAV14DV4A0A0A6YYC5 116 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 A0A1W2PPH5 198 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 MGST3O14880 152 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 CD34P28906 385 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 OR3A1P47881 315 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 BTN1A1Q13410 526 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 ZNF345Q14585 488 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 IL13RA2Q14627 380 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 PIGYQ3MUY2 71 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 RAB22AQ9UL26 194 aa13.76□□□□□ -0.21
SDCBP-201ENST00000260130 OR5H14A6NHG9 310 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 SLC33A1O00400 549 aaPredicted RBP13.75□□□□□ -0.21
SDCBP-201ENST00000260130 DHRS2Q13268 280 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 EDDM3AQ14507 147 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 KRTAP21-3Q3LHN1 58 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 ST8SIA2Q92186 375 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 LHX4Q969G2 390 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 MS4A7Q9GZW8 240 aaPredicted RBP13.75□□□□□ -0.21
SDCBP-201ENST00000260130 C12orf4Q9NQ89 552 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 SLC2A8Q9NY64 477 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 CENPVL3A0A0U1RRI6 287 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 KANTRA0A1W2PQU2 76 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 OR2F2O95006 317 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 RLN2P04090 185 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 SLC25A4P12235 298 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 BPIFB3P59826 476 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 OR2F1Q13607 317 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 KCNRGQ8N5I3 272 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 C1orf147Q96MC9 270 aaPredicted RBP13.75□□□□□ -0.21
SDCBP-201ENST00000260130 METTL8Q9H825 291 aaKnown RBP13.75□□□□□ -0.21
SDCBP-201ENST00000260130 SIRT7Q9NRC8 400 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
SDCBP-201ENST00000260130 A0A1W2PP11 408 aa13.74□□□□□ -0.21
SDCBP-201ENST00000260130 RBM11P57052 281 aaKnown RBP13.74□□□□□ -0.21
SDCBP-201ENST00000260130 MEF2CQ06413 473 aaPredicted RBP13.74□□□□□ -0.21
SDCBP-201ENST00000260130 ZNF273Q14593 569 aa13.74□□□□□ -0.21
SDCBP-201ENST00000260130 RNASE10Q5GAN6 216 aaKnown RBP13.74□□□□□ -0.21
SDCBP-201ENST00000260130 MRPS24Q96EL2 167 aaKnown RBP13.74□□□□□ -0.21
SDCBP-201ENST00000260130 SLC6A7Q99884 636 aa13.74□□□□□ -0.21
SDCBP-201ENST00000260130 PDCD10Q9BUL8 212 aa13.74□□□□□ -0.21
SDCBP-201ENST00000260130 GHRLQ9UBU3 117 aa13.74□□□□□ -0.21
SDCBP-201ENST00000260130 TMEM235A6NFC5 223 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 TCF21O43680 179 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 SCGNO76038 276 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 HLA-AP01891 365 aaKnown RBP13.73□□□□□ -0.21
SDCBP-201ENST00000260130 CSN2P05814 226 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 MOGAT2Q3SYC2 334 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 C11orf87Q6NUJ2 197 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 BRD3OSQ6XYD6 125 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 C9orf139Q6ZV77 190 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 BCL6BQ8N143 479 aaPredicted RBP13.73□□□□□ -0.21
SDCBP-201ENST00000260130 TPRX1Q8N7U7 411 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 ZDHHC22Q8N966 263 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 ZNF418Q8TF45 676 aaPredicted RBP13.73□□□□□ -0.21
SDCBP-201ENST00000260130 FAM46BQ96A09 425 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 UNKLQ9H9P5 680 aaKnown RBP13.73□□□□□ -0.21
SDCBP-201ENST00000260130 ZC4H2Q9NQZ6 224 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 hADV38S2A0JD32 116 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 GEMIN2O14893 280 aaKnown RBP13.73□□□□□ -0.21
SDCBP-201ENST00000260130 CCL3L1P16619 93 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 PRTN3P24158 256 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 LYG2Q86SG7 212 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 LINC00596Q86U02 117 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 SLC25A42Q86VD7 318 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 TNFRSF14Q92956 283 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 ZMAT3Q9HA38 289 aaKnown RBP13.73□□□□□ -0.21
SDCBP-201ENST00000260130 TNFSF18Q9UNG2 199 aa13.73□□□□□ -0.21
SDCBP-201ENST00000260130 hCG_1809904A0A1W2PP81 198 aa13.72□□□□□ -0.21
SDCBP-201ENST00000260130 A0A1W2PPE2 198 aa13.72□□□□□ -0.21
SDCBP-201ENST00000260130 A0A1W2PR64 198 aa13.72□□□□□ -0.21
SDCBP-201ENST00000260130 A0A1W2PRV1 198 aa13.72□□□□□ -0.21
SDCBP-201ENST00000260130 OR7C1O76099 320 aaPredicted RBP13.72□□□□□ -0.21
SDCBP-201ENST00000260130 CTRB1P17538 263 aa13.72□□□□□ -0.21
SDCBP-201ENST00000260130 HLA-GP17693 338 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms