RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ADAP1O75689 374 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 FAM27D1Q5T7N8 215 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 SPNS2Q8IVW8 549 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 TMEM123Q8N131 208 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 SPOCK3Q9BQ16 436 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 ZNF426Q9BUY5 554 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
PRPF38A-201ENST00000257181 RAB4AP20338 218 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 TMEM177Q53S58 311 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 SVBPQ8N300 66 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 HSD17B11Q8NBQ5 300 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 ADAD2Q8NCV1 583 aaKnown RBP11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 SCARB1Q8WTV0 552 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 TET1Q8NFU7 2136 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 SEC22AQ96IW7 307 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 FAM210AQ96ND0 272 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 GPR82Q96P67 336 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 AQP3Q92482 292 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 PRSS45Q7RTY3 260 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 Q9UFV3 132 aa11.47□□□□□ -0.57
PRPF38A-201ENST00000257181 VAX1Q5SQQ9 334 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 DPPA3Q6W0C5 159 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 LINC00114Q6XXX2 140 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 BVESQ8NE79 360 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 SLC25A32Q9H2D1 315 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 SLC25A5P05141 298 aaKnown RBP11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 FAM122CQ6P4D5 195 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 OR2T8A6NH00 312 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 ZP3P21754 424 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 RPL30P62888 115 aaKnown RBP11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 HIST2H3PS2Q5TEC6 136 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 C10orf113Q5VZT2 155 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 C8orf46Q8TAG6 207 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 NPAS1Q99742 590 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 MMP24Q9Y5R2 645 aa11.46□□□□□ -0.57
PRPF38A-201ENST00000257181 A0A087WV48 116 aa11.46□□□□□ -0.58
PRPF38A-201ENST00000257181 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.58
PRPF38A-201ENST00000257181 E9PQ18 207 aa11.46□□□□□ -0.58
PRPF38A-201ENST00000257181 GTF3AQ92664 365 aaKnown RBP11.46□□□□□ -0.58
PRPF38A-201ENST00000257181 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.58
PRPF38A-201ENST00000257181 LCN2P80188 198 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 C16orf82Q7Z2V1 217 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 OR5B3Q8NH48 314 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 REPIN1Q9BWE0 567 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 SLC2A8Q9NY64 477 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 KCNK7Q9Y2U2 307 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 CTRB1P17538 263 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 CTRB2Q6GPI1 263 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 DDB2Q92466 427 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 THADAQ6YHU6 1953 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 FBLL1A6NHQ2 334 aaKnown RBP11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 FCGR3AP08637 254 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 DUX5Q96PT3 197 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 NUP210Q8TEM1 1887 aaPredicted RBP11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 ANKRD20A5PA0PJZ0 165 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 TIMM23O14925 209 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 HYPMO75409 117 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 WNT2P09544 360 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 ZNF146Q15072 292 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 COMMD7Q86VX2 200 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 ZFP82Q8N141 532 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 TXNDC17Q9BRA2 123 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 TMEM165Q9HC07 324 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 SLC25A15Q9Y619 301 aa11.45□□□□□ -0.58
PRPF38A-201ENST00000257181 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 A0A1B0GUS0 222 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 LMX1BO60663 402 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 CEACAM4O75871 244 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 CTSBP07858 339 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 VSIG8P0DPA2 414 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 CRYBB2P43320 205 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 GLDNQ6ZMI3 551 aaPredicted RBP11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 TEPPQ6URK8 271 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 ADAT3Q96EY9 351 aaPredicted RBP11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 SDK1Q7Z5N4 2213 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 UBE2L5PA0A1B0GUS4 154 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 AP4M1O00189 453 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 A0A0G2JMM0 328 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 A0A1W2PPB8 328 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 A0A1W2PRS3 328 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 KIR3DP1A8MWS1 328 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 CDKN1AP38936 164 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 UCP3P55916 312 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 WFIKKN1Q96NZ8 548 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 CEACAM8P31997 349 aaPredicted RBP11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
PRPF38A-201ENST00000257181 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 OR1B1Q8NGR6 318 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 TPPP3Q9BW30 176 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 KCNE5Q9UJ90 142 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms