RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 LGALSLQ3ZCW2 172 aaPredicted RBP16.38■□□□□ 0.21
PTPRE-201ENST00000254667 C5orf17Q8NAS9 161 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 POM121Q96HA1 1249 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 NAAAQ02083 359 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 PRDM6Q9NQX0 595 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 LOC101059948A0A1B0GTJ6 334 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 PHOX2AO14813 284 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 UNQ9370/PRO34162Q6UXP9 181 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM45BQ96B21 275 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 GHITMQ9H3K2 345 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 RNF115Q9Y4L5 304 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 UNC13CQ8NB66 2214 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 LOC390937A0A1W2PQ73 354 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 LNP1A1A4G5 178 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 RIGQ13278 110 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM222Q9H0R3 208 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 NPVFQ9HCQ7 196 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 MPDU1O75352 247 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 FOXJ2Q9P0K8 574 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 GPR132Q9UNW8 380 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 ECSCRQ19T08 205 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 IGSF11Q5DX21 431 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 OR4D10Q8NGI6 311 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 AQP3Q92482 292 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 ELOVL5Q9NYP7 299 aa16.37■□□□□ 0.21
PTPRE-201ENST00000254667 A0A1W2PPE3 182 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 FAM157CP0CG43 387 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 FAM106CPP0CH98 169 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 ZNF658BQ4V348 819 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-201ENST00000254667 SMDT1Q9H4I9 107 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 SIRT7Q9NRC8 400 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 TIAF1O95411 115 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 COL8A1P27658 744 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 CD1BP29016 333 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 REG1BP48304 166 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 CAMPP49913 170 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 AWAT1Q58HT5 328 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 TOMM20LQ6UXN7 152 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 MS4A7Q9GZW8 240 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-201ENST00000254667 WNT5BQ9H1J7 359 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 WASHC3Q9Y3C0 194 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 G6PC2Q9NQR9 355 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 FOXD3Q9UJU5 478 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-201ENST00000254667 HELTA6NFD8 242 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 J3QR89 54 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 ATP6V0CP27449 155 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 LTBRP36941 435 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 ID1P41134 155 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 SNAI3Q3KNW1 292 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM204Q9BSN7 226 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 HIGD1AQ9Y241 93 aa16.36■□□□□ 0.21
PTPRE-201ENST00000254667 LINC01590Q5TEZ4 76 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 TPRX1Q8N7U7 411 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 IGKV3D-11A0A0A0MRZ8 115 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 PAGE4O60829 102 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 NHLH1Q02575 133 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 NHLH2Q02577 135 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 MMD2Q8IY49 270 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 KLF14Q8TD94 323 aaPredicted RBP16.35■□□□□ 0.21
PTPRE-201ENST00000254667 ODAMA1E959 279 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 APCDD1LQ8NCL9 501 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 PARD6AQ9NPB6 346 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 FAM74A7A6NL05 159 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 HNRNPA3P51991 378 aaKnown RBP16.35■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM255AQ5JRV8 349 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 LPAR2Q9HBW0 351 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 DLL3Q9NYJ7 618 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 IDI2-AS1Q9NZ38 188 aa16.35■□□□□ 0.21
PTPRE-201ENST00000254667 A0A1W2PP11 408 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 MFNGO00587 321 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 OR5AL1P0C617 328 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 CDK2AP1O14519 115 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 HYPMO75409 117 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 SCTP09683 121 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 USF1P22415 310 aaPredicted RBP16.34■□□□□ 0.21
PTPRE-201ENST00000254667 SELENOTP62341 195 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 H1FOOQ8IZA3 346 aaPredicted RBP16.34■□□□□ 0.21
PTPRE-201ENST00000254667 MS4A10Q96PG2 267 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 LYRM2Q9NU23 88 aaPredicted RBP16.34■□□□□ 0.21
PTPRE-201ENST00000254667 SRSF10O75494 262 aaKnown RBP16.34■□□□□ 0.21
PTPRE-201ENST00000254667 VSIG10L2P0DP72 767 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 STARD4Q96DR4 205 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 TIMP4Q99727 224 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 PRR19A6NJB7 356 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 KLRB1Q12918 225 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 RBPMS2Q6ZRY4 209 aaKnown RBP16.34■□□□□ 0.21
PTPRE-201ENST00000254667 FAM222BQ8WU58 562 aa16.34■□□□□ 0.21
PTPRE-201ENST00000254667 PTGDSP41222 190 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 OR10D4PQ8NGN7 298 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 MIOXQ9UGB7 285 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 PLXNA1Q9UIW2 1896 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 TCAPO15273 167 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 CCKARP32238 428 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 EGR4Q05215 589 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 ZNF826PQ6ZT77 177 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 Q6ZT83 130 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 DYNLRB2Q8TF09 96 aa16.33■□□□□ 0.21
PTPRE-201ENST00000254667 VWCEQ96DN2 955 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms