RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 RPP25LQ8N5L8 163 aaKnown RBP17.48■□□□□ 0.39
RARA-201ENST00000254066 TAF15Q92804 592 aaKnown RBP eCLIP17.48■□□□□ 0.39
RARA-201ENST00000254066 GPR146Q96CH1 333 aa17.48■□□□□ 0.39
RARA-201ENST00000254066 ZNF442Q9H7R0 627 aa17.48■□□□□ 0.39
RARA-201ENST00000254066 A0A1W2PQF6 199 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 SLC22A20A6NK97 555 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 J3QW42 95 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 HS3ST1O14792 307 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 TMPRSS2O15393 492 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 SYNGR2O43760 224 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 RBM11P57052 281 aaKnown RBP17.47■□□□□ 0.39
RARA-201ENST00000254066 FAM78BQ5VT40 261 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 BRICD5Q6PL45 260 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 LSM10Q969L4 123 aaKnown RBP17.47■□□□□ 0.39
RARA-201ENST00000254066 TECTBQ96PL2 329 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 CSTL1Q9H114 145 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 PSENENQ9NZ42 101 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 WIPI2Q9Y4P8 454 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 H3BP45 60 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 CELA2BP08218 269 aaPredicted RBP17.47■□□□□ 0.39
RARA-201ENST00000254066 TMEM42Q69YG0 159 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 OR4F5Q8NH21 305 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 OR4F4Q96R69 305 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 SLC45A2Q9UMX9 530 aa17.47■□□□□ 0.39
RARA-201ENST00000254066 IGKV1-12A0A0C4DH73 117 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 TRBV11-1A0A0K0K1C0 115 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 NKX6-3A6NJ46 265 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 IGKV1D-12P01611 117 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 F2RP25116 425 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 BATFQ16520 125 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 RNF138Q8WVD3 245 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 STRADBQ9C0K7 418 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 SOHLH2Q9NX45 425 aa17.46■□□□□ 0.39
RARA-201ENST00000254066 NXPH3O95157 252 aa17.46■□□□□ 0.38
RARA-201ENST00000254066 OR13H1Q8NG92 308 aa17.46■□□□□ 0.38
RARA-201ENST00000254066 ALKBH3Q96Q83 286 aaPredicted RBP17.46■□□□□ 0.38
RARA-201ENST00000254066 PAM16Q9Y3D7 125 aa17.46■□□□□ 0.38
RARA-201ENST00000254066 TRAV9-1A0A075B6T8 112 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 PGLYRP1O75594 196 aaPredicted RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 HOXB2P14652 356 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 FBXW4P57775 412 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 ARL16Q0P5N6 197 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 PLPPR5Q32ZL2 321 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 FOXJ2Q9P0K8 574 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 SLC33A1O00400 549 aaPredicted RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 FKBP2P26885 142 aaKnown RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 FUT6P51993 359 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 TDRG1Q3Y452 100 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 SLC22A18ASQ8N1D0 253 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 OR5AU1Q8NGC0 362 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 KCNE4Q8WWG9 221 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 CIB3Q96Q77 187 aaPredicted RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 RYDENQ9NUL5 291 aaKnown RBP17.45■□□□□ 0.38
RARA-201ENST00000254066 ELOVL5Q9NYP7 299 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 ZNF391Q9UJN7 358 aa17.45■□□□□ 0.38
RARA-201ENST00000254066 KIR2DS1A0A191URI9 304 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 C2orf72A6NCS6 295 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 AQP7P3A6NL99 342 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 KIR2DS4P43632 304 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 KIR2DS1Q14954 304 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 HAPLN4Q86UW8 402 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 OR4C12Q96R67 309 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 C2orf16Q68DN1 1984 aa17.44■□□□□ 0.38
RARA-201ENST00000254066 LRP5LA4QPB2 252 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 CEACAM8P31997 349 aaPredicted RBP17.43■□□□□ 0.38
RARA-201ENST00000254066 TESK1Q15569 626 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 SNAI3Q3KNW1 292 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 OR8G2PQ6IF36 304 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 LINC01551Q86U37 167 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 OR2D3Q8NGH3 330 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 NABP1Q96AH0 204 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 TECTAO75443 2155 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 IGLV3-32A0A0A0MS00 114 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 A0A0G2JRQ6 117 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 NRASP01111 189 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 ADMP35318 185 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 MPLP40238 635 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 PTTG1IPP53801 180 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 MRPL49Q13405 166 aaKnown RBP17.43■□□□□ 0.38
RARA-201ENST00000254066 MSMO1Q15800 293 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.43■□□□□ 0.38
RARA-201ENST00000254066 TMEM54Q969K7 222 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 GMPPAQ96IJ6 420 aaPredicted RBP17.43■□□□□ 0.38
RARA-201ENST00000254066 CCL28Q9NRJ3 127 aa17.43■□□□□ 0.38
RARA-201ENST00000254066 IGKV1D-13A0A0B4J2D9 117 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 KRASP01116 189 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 IGKV1D-33P01593 117 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 IGKV1-33P01594 117 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 IGKV1-13P0DP09 117 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 RNF2Q99496 336 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 MYO7BQ6PIF6 2116 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 ZNF814B7Z6K7 855 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 PDE6DO43924 150 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 NAPSAO96009 420 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 SERPINE2P07093 398 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 TFPI2P48307 235 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 OR5P3Q8WZ94 311 aa17.42■□□□□ 0.38
RARA-201ENST00000254066 HSPB9Q9BQS6 159 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms