RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 KCNS2Q9ULS6 477 aa12.38□□□□□ -0.43
MBD4-201ENST00000249910 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
MBD4-201ENST00000249910 LRBAP50851 2863 aa12.38□□□□□ -0.43
MBD4-201ENST00000249910 A0A0G2JRQ6 117 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 E5RGE8 158 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 SPRY3O43610 288 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 MDH2P40926 338 aaKnown RBP12.37□□□□□ -0.43
MBD4-201ENST00000249910 GLIPR1P48060 266 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 COL10A1Q03692 680 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 C16orf54Q6UWD8 224 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 COQ2Q96H96 371 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 NSG2Q9Y328 171 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 C1QTNF9BB2RNN3 333 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 C12orf77C9JDV5 145 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 HEXAP06865 529 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 FAM87AP0C7U9 286 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 EGR1P18146 543 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 EPHA1P21709 976 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 OMGP23515 440 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 UCP1P25874 307 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 CEACAM8P31997 349 aaPredicted RBP12.37□□□□□ -0.43
MBD4-201ENST00000249910 RND3P61587 244 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 PLPPR2Q96GM1 343 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
MBD4-201ENST00000249910 PFDN5Q99471 154 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 NCOR1P1Q9H4R4 102 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 PLA2G2EQ9NZK7 142 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
MBD4-201ENST00000249910 IGHV3OR15-7A0A075B7D8 119 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 A0A0G2JNJ9 132 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 ZNF705EA8MWA4 302 aaPredicted RBP12.36□□□□□ -0.43
MBD4-201ENST00000249910 NDUFB7P17568 137 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 SSTR5P35346 364 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 CAV2P51636 162 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 RNF141Q8WVD5 230 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 OR2V2Q96R30 315 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 Q9UFV3 132 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 DMRT1Q9Y5R6 373 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 FAM24AA6NFZ4 105 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.36□□□□□ -0.43
MBD4-201ENST00000249910 SSSCA1O60232 199 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 NKX2-1P43699 371 aaPredicted RBP12.36□□□□□ -0.43
MBD4-201ENST00000249910 ID4P47928 161 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 SRSF3P84103 164 aaKnown RBP12.36□□□□□ -0.43
MBD4-201ENST00000249910 EDDM3AQ14507 147 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 GNMTQ14749 295 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 OR2B11Q5JQS5 317 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 HSD17B13Q7Z5P4 300 aaPredicted RBP12.36□□□□□ -0.43
MBD4-201ENST00000249910 CD177Q8N6Q3 437 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 SNRNP40Q96DI7 357 aaKnown RBP12.36□□□□□ -0.43
MBD4-201ENST00000249910 SFXN3Q9BWM7 321 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 TLNRD1Q9H1K6 362 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
MBD4-201ENST00000249910 ABCA4P78363 2273 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 IGHV3-43A0A0B4J1X8 118 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 DEFB108AA8MXU0 73 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 SERPINE2P07093 398 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 IGHV3-43DP0DP04 118 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 VDAC1P21796 283 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 LMO1P25800 156 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 CCKARP32238 428 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 TDGF1P3P51864 188 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 LINC00205P59089 165 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 TBR1Q16650 682 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 LTC4SQ16873 150 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 NMSQ5H8A3 153 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
MBD4-201ENST00000249910 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 SSX3Q99909 188 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 DNTTIP1Q9H147 329 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 HRH4Q9H3N8 390 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 PRRG2O14669 202 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 FGF16O43320 207 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 TMEM50AO95807 157 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 APOC3P02656 99 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 Q6ZRM9 215 aa12.35□□□□□ -0.43
MBD4-201ENST00000249910 COL12A1Q99715 3063 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 MED19A0JLT2 244 aaPredicted RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 H0Y980 276 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 ATG12O94817 140 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 IGKV1-39P01597 117 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 IGKV1D-39P04432 117 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 KLF3P57682 345 aaPredicted RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 NKX6-1P78426 367 aaPredicted RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 SRPXP78539 464 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 HMGN3Q15651 99 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 SMIM21Q3B7S5 101 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 KRBOX4Q5JUW0 171 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 GFRALQ6UXV0 394 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 MOB1BQ7L9L4 216 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 MOGAT3Q86VF5 341 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms