RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 A0A1B0GW64 132 aa21.57■■□□□ 1.04
RAB40C-201ENST00000248139 CD46P15529 392 aa21.57■■□□□ 1.04
RAB40C-201ENST00000248139 MPV17P39210 176 aa21.57■■□□□ 1.04
RAB40C-201ENST00000248139 RPS10P46783 165 aaKnown RBP21.57■■□□□ 1.04
RAB40C-201ENST00000248139 LINC00205P59089 165 aa21.57■■□□□ 1.04
RAB40C-201ENST00000248139 NCMAPQ5T1S8 102 aa21.57■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF808Q8N4W9 903 aaPredicted RBP21.57■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF665Q9H7R5 613 aa21.57■■□□□ 1.04
RAB40C-201ENST00000248139 RAMP3O60896 148 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 IFNA5P01569 189 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 IGHV1-2P23083 117 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF766Q5HY98 468 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 SP5Q6BEB4 398 aaPredicted RBP21.56■■□□□ 1.04
RAB40C-201ENST00000248139 DRAM1Q8N682 238 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 OR1L1Q8NH94 360 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.56■■□□□ 1.04
RAB40C-201ENST00000248139 PSG7Q13046 419 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 TPRX1Q8N7U7 411 aa21.56■■□□□ 1.04
RAB40C-201ENST00000248139 UBE2CO00762 179 aa21.55■■□□□ 1.04
RAB40C-201ENST00000248139 OR8U8P0C7N1 319 aa21.55■■□□□ 1.04
RAB40C-201ENST00000248139 MMP9P14780 707 aa21.55■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF726P1Q15940 193 aa21.55■■□□□ 1.04
RAB40C-201ENST00000248139 NANOS1Q8WY41 292 aaKnown RBP21.55■■□□□ 1.04
RAB40C-201ENST00000248139 CDH20Q9HBT6 801 aa21.55■■□□□ 1.04
RAB40C-201ENST00000248139 CXCL1P09341 107 aa21.54■■□□□ 1.04
RAB40C-201ENST00000248139 ELLP55199 621 aaPredicted RBP21.54■■□□□ 1.04
RAB40C-201ENST00000248139 ERVK11-1P61568 191 aa21.54■■□□□ 1.04
RAB40C-201ENST00000248139 TLE4Q04727 773 aa21.54■■□□□ 1.04
RAB40C-201ENST00000248139 KDF1Q8NAX2 398 aaPredicted RBP21.54■■□□□ 1.04
RAB40C-201ENST00000248139 MUCL1Q96DR8 90 aa21.54■■□□□ 1.04
RAB40C-201ENST00000248139 OR8G2PQ6IF36 304 aa21.54■■□□□ 1.04
RAB40C-201ENST00000248139 RAB40CQ96S21 281 aa21.54■■□□□ 1.04
RAB40C-201ENST00000248139 RYDENQ9NUL5 291 aaKnown RBP21.54■■□□□ 1.04
RAB40C-201ENST00000248139 LRP5LA4QPB2 252 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 HMGB3O15347 200 aaKnown RBP21.53■■□□□ 1.04
RAB40C-201ENST00000248139 CEACAM1P13688 526 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 UBE2NP61088 152 aaKnown RBP21.53■■□□□ 1.04
RAB40C-201ENST00000248139 RAB11AP62491 216 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 AESQ08117 197 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 OR52L2PQ8NGH6 319 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 FER1L6-AS2Q96M78 137 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 YPEL4Q96NS1 127 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 OBP2BQ9NPH6 170 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 UFSP2Q9NUQ7 469 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 KRASP01116 189 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 OR3A1P47881 315 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF816Q0VGE8 651 aaPredicted RBP21.53■■□□□ 1.04
RAB40C-201ENST00000248139 FGFRL1Q8N441 504 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF525Q8N782 197 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 CNEP1R1Q8N9A8 125 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 SCGB1C1Q8TD33 95 aa21.53■■□□□ 1.04
RAB40C-201ENST00000248139 CD55P08174 381 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 PGA5P0DJD9 388 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 ERVFRD-1P60508 538 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 ZNF506Q5JVG8 444 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 HEPN1Q6WQI6 88 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 Q8WTZ3 238 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 CACNA1HO95180 2353 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 DFFBO76075 338 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 RPL30P62888 115 aaKnown RBP21.52■■□□□ 1.04
RAB40C-201ENST00000248139 BTNL3Q6UXE8 466 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 BEND4Q6ZU67 534 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 LILRB2Q8N423 598 aa21.52■■□□□ 1.04
RAB40C-201ENST00000248139 CNOT1A5YKK6 2376 aaKnown RBP21.52■■□□□ 1.04
RAB40C-201ENST00000248139 TGIF2-C20orf24A0A0A6YYL0 155 aa21.52■■□□□ 1.03
RAB40C-201ENST00000248139 C5orf30Q96GV9 206 aa21.52■■□□□ 1.03
RAB40C-201ENST00000248139 TRIB1Q96RU8 372 aa21.52■■□□□ 1.03
RAB40C-201ENST00000248139 IGHV2-5P01817 119 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 G6PCP35575 357 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 OR8G1Q15617 311 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 SPINK9Q5DT21 86 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 Q6ZR03 302 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 PLPPR2Q96GM1 343 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 OR4C12Q96R67 309 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 BTBD17A6NE02 478 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 SH2D1BO14796 132 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 YIF1AO95070 293 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 HAND1O96004 215 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 PRAMEF6Q5VXH4 476 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 OR2D2Q9H210 308 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 IFT22Q9H7X7 185 aa21.51■■□□□ 1.03
RAB40C-201ENST00000248139 SOX8P57073 446 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 KLF14Q8TD94 323 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-201ENST00000248139 NIPSNAP3BQ9BS92 247 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 NIT2Q9NQR4 276 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 METRNQ9UJH8 293 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 POLDIP2Q9Y2S7 368 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 ICE1Q9Y2F5 2266 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 TTC28Q96AY4 2481 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 CADP27708 2225 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 IGHV3-43A0A0B4J1X8 118 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 UBE2L5PA0A1B0GUS4 154 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 HSPB1P04792 205 aaKnown RBP21.5■■□□□ 1.03
RAB40C-201ENST00000248139 IGHV3-43DP0DP04 118 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 ZNF787Q6DD87 383 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 RFESDQ8TAC1 157 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 TMEM9BQ9NQ34 198 aa21.5■■□□□ 1.03
RAB40C-201ENST00000248139 MLNRO43193 412 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 ALKBH2Q6NS38 261 aa21.49■■□□□ 1.03
RAB40C-201ENST00000248139 OR8G5Q8NG78 346 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms