RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 B3GAT1Q9P2W7 334 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 RNF24Q9Y225 148 aa9.98□□□□□ -0.81
SOX9-201ENST00000245479 MUC6Q6W4X9 2439 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 ARHGAP21Q5T5U3 1957 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 LRP5LA4QPB2 252 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 ERVFC1-1P60608 527 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 SLC38A11Q08AI6 406 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 C10orf91Q5T1B1 145 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 TP53RKQ96S44 253 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 SRXN1Q9BYN0 137 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 SRD5A3Q9H8P0 318 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 FAM206AQ9NX38 181 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 BET1LQ9NYM9 111 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 NAT8BQ9UHF3 227 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 RFNGQ9Y644 331 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 PDCD6O75340 191 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 MDH2P40926 338 aaKnown RBP9.97□□□□□ -0.81
SOX9-201ENST00000245479 TMEM50BP56557 158 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 TGFBR3Q03167 851 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 CATR1Q13166 79 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 HSPB9Q9BQS6 159 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 C2orf88Q9BSF0 95 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 TLN1Q9Y490 2541 aaKnown RBP9.97□□□□□ -0.81
SOX9-201ENST00000245479 LAMA5O15230 3695 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 A0A087WWC5 75 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 HSBP1O75506 76 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 SYNGR4O95473 234 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 APLNRP35414 380 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 SRSF4Q08170 494 aaKnown RBP9.97□□□□□ -0.81
SOX9-201ENST00000245479 ABLIM2Q6H8Q1 611 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 GAPTQ8N292 157 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 OR10G9Q8NGN4 311 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 OR10G7Q8NGN6 311 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 OR4X1Q8NH49 305 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 OR5R1Q8NH85 324 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 MARS2Q96GW9 593 aaKnown RBP9.97□□□□□ -0.81
SOX9-201ENST00000245479 HEYLQ9NQ87 328 aaPredicted RBP9.97□□□□□ -0.81
SOX9-201ENST00000245479 IL36RNQ9UBH0 155 aa9.97□□□□□ -0.81
SOX9-201ENST00000245479 CHD8Q9HCK8 2581 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 RNF212BA8MTL3 300 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 TRDCB7Z8K6 153 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 HRASP01112 189 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 MAGEA5P43359 124 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 TUSC5Q8IXB3 177 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.81
SOX9-201ENST00000245479 ANAPC16Q96DE5 110 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 FOXB1Q99853 325 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 EML6Q6ZMW3 1958 aa9.96□□□□□ -0.81
SOX9-201ENST00000245479 ANKRD30BLA7E2S9 258 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 SLC25A6P12236 298 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 NPBWR2P48146 333 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 TCTEX1D1Q8N7M0 179 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.82
SOX9-201ENST00000245479 ZNF331Q9NQX6 463 aaPredicted RBP9.96□□□□□ -0.82
SOX9-201ENST00000245479 ERRFI1Q9UJM3 462 aaPredicted RBP9.96□□□□□ -0.82
SOX9-201ENST00000245479 FOXD3Q9UJU5 478 aaPredicted RBP9.96□□□□□ -0.82
SOX9-201ENST00000245479 GTF3C1Q12789 2109 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 CREBBPQ92793 2442 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 SYNGR2O43760 224 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 PAGE4O60829 102 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 KRASP01116 189 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 GYPAP02724 150 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 SELLP14151 372 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 IGFBP3P17936 291 aaPredicted RBP9.96□□□□□ -0.82
SOX9-201ENST00000245479 PMELP40967 661 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 PCBD1P61457 104 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 SPINK9Q5DT21 86 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 ZNF808Q8N4W9 903 aaPredicted RBP9.96□□□□□ -0.82
SOX9-201ENST00000245479 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 SLC35D1Q9NTN3 355 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 PTPRSQ13332 1948 aa9.96□□□□□ -0.82
SOX9-201ENST00000245479 IGKV1-9A0A0C4DH69 117 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 SIRPB1O00241 398 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 FGF5P12034 268 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 ZNF17P17021 662 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 ERVK-16P61578 105 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 SUPT4H1P63272 117 aaKnown RBP9.95□□□□□ -0.82
SOX9-201ENST00000245479 MEF2BQ02080 365 aaPredicted RBP9.95□□□□□ -0.82
SOX9-201ENST00000245479 DMBX1Q8NFW5 382 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 SGMS2Q8NHU3 365 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 RFESDQ8TAC1 157 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 SAP25Q8TEE9 199 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 CCL28Q9NRJ3 127 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 SLC7A10Q9NS82 523 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 RALYQ9UKM9 306 aaKnown RBP9.95□□□□□ -0.82
SOX9-201ENST00000245479 ARL2-SNX15V9GYD0 113 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 ZFHX4Q86UP3 3567 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 A0A0A6YYD4 124 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 TFF1P04155 84 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 LSM6P62312 80 aaKnown RBP9.95□□□□□ -0.82
SOX9-201ENST00000245479 WDR74Q6RFH5 385 aaPredicted RBP9.95□□□□□ -0.82
SOX9-201ENST00000245479 BOD1Q96IK1 185 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 FOXJ2Q9P0K8 574 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 DUSP13Q9UII6 198 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 TUBD1Q9UJT1 453 aa9.95□□□□□ -0.82
SOX9-201ENST00000245479 KIAA1549LQ6ZVL6 1849 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms