RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 FHITP49789 147 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 LINC00205P59089 165 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 PRSS54Q6PEW0 395 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 BTNL3Q6UXE8 466 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 LRP11Q86VZ4 500 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 LILRB1Q8NHL6 650 aaPredicted RBP7.27□□□□□ -1.24
VPS4B-201ENST00000238497 GTF3AQ92664 365 aaKnown RBP7.27□□□□□ -1.24
VPS4B-201ENST00000238497 ERGIC1Q969X5 290 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 RASL12Q9NYN1 266 aa7.27□□□□□ -1.24
VPS4B-201ENST00000238497 NF1P21359 2839 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 VPS13CQ709C8 3753 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 SHISA9B4DS77 424 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 F8W036 122 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 LY6HO94772 140 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 MBPP02686 304 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-201ENST00000238497 AKR1C3P42330 323 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 ALDH3B1P43353 468 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 OR3A1P47881 315 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 BLOC1S1P78537 153 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 Q6ZPA2 131 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 SSX8Q7RTT4 187 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 BPIFCQ8NFQ6 507 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 LHFPL5Q8TAF8 219 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 MRPS24Q96EL2 167 aaKnown RBP7.27□□□□□ -1.25
VPS4B-201ENST00000238497 TMEM204Q9BSN7 226 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 KIF25Q9UIL4 384 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 CRYM-AS1A6NIL9 109 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 CECR9P0C854 216 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 S100GP29377 79 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 SSX9Q7RTT3 188 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 CCDC54Q8NEL0 328 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 C1orf162Q8NEQ5 155 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-201ENST00000238497 NMES1Q9C002 83 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 HSF4Q9ULV5 492 aa7.27□□□□□ -1.25
VPS4B-201ENST00000238497 NSD1Q96L73 2696 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-201ENST00000238497 ARPC4-TTLL3A0A0A6YYG9 625 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 TRAV24A0A0B4J272 114 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 VSTM5A8MXK1 200 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 ST8SIA3O43173 380 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 KRASP01116 189 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 DTYMKP23919 212 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 NKX2-1P43699 371 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 SRSF3P84103 164 aaKnown RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 ZNF816Q0VGE8 651 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 TMEM65Q6PI78 240 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 COLCA1Q6ZS62 124 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 DHRS9Q9BPW9 319 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 EIF5A2Q9GZV4 153 aaKnown RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 SLC25A32Q9H2D1 315 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 MPC1Q9Y5U8 109 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 SH2D1BO14796 132 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 DANCRP0C864 163 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 PSG2P11465 335 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 ATRAIDQ6UW56 229 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 LIAT1Q6ZQX7 453 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 SLC38A6Q8IZM9 456 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 PLPPR1Q8TBJ4 325 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 Q9N2K0 584 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 DYNLRB1Q9NP97 96 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 KCNIP1Q9NZI2 227 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 YLPM1P49750 1951 aaKnown RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 IGHV1-18A0A0C4DH31 117 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 KIR2DS1A0A191URI9 304 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 A0A1W2PPE3 182 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 FOXI3A8MTJ6 420 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 TRDCB7Z8K6 153 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 RPS2P15880 293 aaKnown RBP7.26□□□□□ -1.25
VPS4B-201ENST00000238497 CD80P33681 288 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 KIR2DS4P43632 304 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 KIR2DS1Q14954 304 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 HERPUD1Q15011 391 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 ZNF718Q3SXZ3 478 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 CLEC2AQ6UVW9 174 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 WDR86Q86TI4 376 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 LRRC75A-AS1Q8N1F1 130 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 POC1AQ8NBT0 407 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 MARC2Q969Z3 335 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 SPSB4Q96A44 273 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 C20orf24Q9BUV8 137 aa7.26□□□□□ -1.25
VPS4B-201ENST00000238497 ZNF469Q96JG9 3925 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-201ENST00000238497 J3QT63 122 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 GPR31O00270 319 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 SLC25A4P12235 298 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 CAMLGP49069 296 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 PPT1P50897 306 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 TMEM187Q14656 261 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 TMEM182Q6ZP80 229 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-201ENST00000238497 OR52L2PQ8NGH6 319 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 OR1L1Q8NH94 360 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 FAM213BQ8TBF2 198 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 LRRC29Q8WV35 223 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 LEAP2Q969E1 77 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 NUDT16L1Q9BRJ7 211 aaKnown RBP7.25□□□□□ -1.25
VPS4B-201ENST00000238497 MYOZ1Q9NP98 299 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-201ENST00000238497 CBLN4Q9NTU7 201 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 METRNQ9UJH8 293 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 NSG2Q9Y328 171 aa7.25□□□□□ -1.25
VPS4B-201ENST00000238497 IGKV1-6A0A0C4DH72 117 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms