RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 TMEM138Q9NPI0 162 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 ERVK13-1Q9NX77 482 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 AASSQ9UDR5 926 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 TRAPPC2LQ9UL33 140 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 ING4Q9UNL4 249 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 GMPPBQ9Y5P6 360 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 HECTD4Q9Y4D8 3996 aa8.88□□□□□ -0.99
FRG1-201ENST00000226798 SAC3D1A6NKF1 404 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 SNTNA6NMZ2 147 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 SC5DO75845 299 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 HSPB1P04792 205 aaKnown RBP8.87□□□□□ -0.99
FRG1-201ENST00000226798 CD2P06729 351 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 GTF2F2P13984 249 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 GABRB1P18505 474 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 RCC1P18754 421 aaPredicted RBP8.87□□□□□ -0.99
FRG1-201ENST00000226798 GTF2A1P52655 376 aaPredicted RBP8.87□□□□□ -0.99
FRG1-201ENST00000226798 SLC22A6Q4U2R8 563 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 MORN2Q502X0 79 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 LIN54Q6MZP7 749 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 TRAT1Q6PIZ9 186 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 SGPP2Q8IWX5 399 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 OR4K15Q8NH41 348 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 GPR148Q8TDV2 347 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 MBNL3Q9NUK0 354 aaKnown RBP8.87□□□□□ -0.99
FRG1-201ENST00000226798 ETAA1Q9NY74 926 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 STUB1Q9UNE7 303 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 HERC2O95714 4834 aa8.87□□□□□ -0.99
FRG1-201ENST00000226798 MCRIP1C9JLW8 97 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 ARPC1BO15143 372 aaKnown RBP8.86□□□□□ -0.99
FRG1-201ENST00000226798 JTBO76095 146 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
FRG1-201ENST00000226798 BDKRB2P30411 391 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 GBX2P52951 348 aaPredicted RBP8.86□□□□□ -0.99
FRG1-201ENST00000226798 PPP3R1P63098 170 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 HAGHQ16775 308 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 LRRC36Q1X8D7 754 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 ZNF660Q6AZW8 331 aaPredicted RBP8.86□□□□□ -0.99
FRG1-201ENST00000226798 XAF1Q6GPH4 301 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 RAB12Q6IQ22 244 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 PYHIN1Q6K0P9 492 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 CD200R1LQ6Q8B3 271 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 ZNF554Q86TJ5 538 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 FLYWCH2Q96CP2 140 aaKnown RBP8.86□□□□□ -0.99
FRG1-201ENST00000226798 CYYR1Q96J86 154 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 S100A13Q99584 98 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 TAF9BQ9HBM6 251 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 OR2S2Q9NQN1 319 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 KIAA1456Q9P272 454 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 JPT1Q9UK76 154 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 ERGIC3Q9Y282 383 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 NUBP2Q9Y5Y2 271 aa8.86□□□□□ -0.99
FRG1-201ENST00000226798 SAA2-SAA4A0A096LPE2 208 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 CA11O75493 328 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 FADS2O95864 444 aaKnown RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 IGHV3-11P01762 117 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 LIMS3P0CW19 117 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 LIMS4P0CW20 117 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 SAA2P0DJI9 122 aaPredicted RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 IGFBP3P17936 291 aaPredicted RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 PPP1CCP36873 323 aaKnown RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 OR3A3P47888 321 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 CX3CL1P78423 397 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 RAB40BQ12829 278 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 LY6G6FQ5SQ64 297 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 OR52L2PQ8NGH6 319 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 OR52I1Q8NGK6 324 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 ORAI1Q96D31 301 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 MRPS24Q96EL2 167 aaKnown RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 ZNF184Q99676 751 aaPredicted RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 THAP7Q9BT49 309 aaPredicted RBP8.85□□□□□ -0.99
FRG1-201ENST00000226798 ELOVL1Q9BW60 279 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 A3GALT2U3KPV4 340 aa8.85□□□□□ -0.99
FRG1-201ENST00000226798 EI24O14681 340 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 RRHO14718 337 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 ARSBP15848 533 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 HTD2P86397 168 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 RIPK1Q13546 671 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 GPR176Q14439 515 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 CCDC58Q4VC31 144 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 AKIRIN2Q53H80 203 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 ACTBL2Q562R1 376 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 FAM71F2Q6NXP2 309 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 RPL22L1Q6P5R6 122 aaKnown RBP8.84□□□□□ -0.99
FRG1-201ENST00000226798 FAM131AQ6UXB0 335 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 C5orf24Q7Z6I8 188 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 ANKRD13BQ86YJ7 626 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 RHOVQ96L33 236 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 RSRP1Q9BUV0 290 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 IFI27L2Q9H2X8 130 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 FBXL15Q9H469 300 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 AMBNQ9NP70 447 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 MRPS18AQ9NVS2 196 aaKnown RBP8.84□□□□□ -0.99
FRG1-201ENST00000226798 GAB2Q9UQC2 676 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 ORC6Q9Y5N6 252 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 PEX16Q9Y5Y5 336 aa8.84□□□□□ -0.99
FRG1-201ENST00000226798 FAM90A7PA6NKC0 464 aa8.83□□□□□ -1
FRG1-201ENST00000226798 FAM90A23PA8MXZ1 464 aa8.83□□□□□ -1
FRG1-201ENST00000226798 FCN1O00602 326 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms