RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 IL18BPO95998 194 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 RPS16P62249 146 aaKnown RBP10.52□□□□□ -0.73
NUP88-201ENST00000225696 SRYQ05066 204 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 FAM53AQ6NSI3 398 aaPredicted RBP10.52□□□□□ -0.73
NUP88-201ENST00000225696 ZNF664Q8N3J9 261 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 TECTBQ96PL2 329 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 PITPNC1Q9UKF7 332 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 LAMP3Q9UQV4 416 aa10.52□□□□□ -0.73
NUP88-201ENST00000225696 AHCTF1Q8WYP5 2266 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 IGHV3-64DA0A0J9YX35 117 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 UBE2L5PA0A1B0GUS4 154 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 DNPH1O43598 174 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 OPN1MWP04001 364 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 OPN1MW2P0DN77 364 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 OPN1MW3P0DN78 364 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 PAX1P15863 534 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 TMEM183AQ8IXX5 376 aa10.51□□□□□ -0.73
NUP88-201ENST00000225696 WDR61Q9GZS3 305 aaKnown RBP10.51□□□□□ -0.73
NUP88-201ENST00000225696 TSTD3H0UI37 97 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 JOSD1Q15040 202 aaPredicted RBP10.5□□□□□ -0.73
NUP88-201ENST00000225696 OR8G2PQ6IF36 304 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 ACSM6Q6P461 480 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 MRPL21Q7Z2W9 205 aaKnown RBP10.5□□□□□ -0.73
NUP88-201ENST00000225696 MRGPRGQ86SM5 289 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 MKXQ8IYA7 352 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 LILRB2Q8N423 598 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 PSMF1Q92530 271 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 WFIKKN1Q96NZ8 548 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 PCGF1Q9BSM1 259 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 DOCK10Q96BY6 2186 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 CD300LBA8K4G0 201 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 K7ESF4 209 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 SLC31A2O15432 143 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 CYTIPO60759 359 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 WDR1O75083 606 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 P04436 131 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 CELA3AP09093 270 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 CTXN2P0C2S0 81 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 RPL23P62829 140 aaKnown RBP10.5□□□□□ -0.73
NUP88-201ENST00000225696 TMEM41BQ5BJD5 291 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 NCR3LG1Q68D85 454 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 OR10V1Q8NGI7 309 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 OR51G1Q8NGK1 321 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 OR2Y1Q8NGV0 311 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 KCNE4Q8WWG9 221 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 LHX4Q969G2 390 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 CDX2Q99626 313 aaPredicted RBP10.5□□□□□ -0.73
NUP88-201ENST00000225696 PSMG3Q9BT73 122 aaPredicted RBP10.5□□□□□ -0.73
NUP88-201ENST00000225696 SLC25A22Q9H936 323 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 DLL3Q9NYJ7 618 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 PRSS50Q9UI38 385 aa10.5□□□□□ -0.73
NUP88-201ENST00000225696 XKRY2A2RUG3 117 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 A8MWP6 167 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 GNB2P62879 340 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
NUP88-201ENST00000225696 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.49□□□□□ -0.73
NUP88-201ENST00000225696 TUSC5Q8IXB3 177 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 SAXO1Q8IYX7 474 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 OR1P1Q8NH06 330 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 OR5R1Q8NH85 324 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 IFI44Q8TCB0 444 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 OR5P3Q8WZ94 311 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 TAF15Q92804 592 aaKnown RBP eCLIP10.49□□□□□ -0.73
NUP88-201ENST00000225696 POM121Q96HA1 1249 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 SGCZQ96LD1 299 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 P2RX4Q99571 388 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 DUSP23Q9BVJ7 150 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 PCSK5Q92824 1860 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 MRPL33O75394 65 aaKnown RBP10.49□□□□□ -0.73
NUP88-201ENST00000225696 SLC25A6P12236 298 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 GDF1P27539 372 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 GFRA1P56159 465 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 HOXA4Q00056 320 aaPredicted RBP10.49□□□□□ -0.73
NUP88-201ENST00000225696 TMEM241Q24JQ0 296 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 ZNF66Q6ZN08 573 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 SPEM1Q8N4L4 309 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 TMEM37Q8WXS4 190 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 PYGO2Q9BRQ0 406 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
NUP88-201ENST00000225696 TNRC6AQ8NDV7 1962 aaKnown RBP10.49□□□□□ -0.73
NUP88-201ENST00000225696 A0A1W2PPQ1 181 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 ZNF705GA8MUZ8 300 aaPredicted RBP10.48□□□□□ -0.73
NUP88-201ENST00000225696 RAMP3O60896 148 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 OTX2P32243 289 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SSTP61278 116 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SERF2P84101 59 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SLC38A11Q08AI6 406 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 IL11RAQ14626 422 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 BSXQ3C1V8 233 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SPATA46Q5T0L3 261 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SPINK14Q6IE38 97 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 CYP2G1PQ6ZSU1 146 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 VASH2Q86V25 355 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 PARLQ9H300 379 aa10.48□□□□□ -0.73
NUP88-201ENST00000225696 SLC39A9Q9NUM3 307 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms