RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 LPLP06858 475 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 CBX5P45973 191 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 PRRX1P54821 245 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 DEFB112Q30KQ8 113 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 MIDNQ504T8 468 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 CT45A1Q5HYN5 189 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 FAM131AQ6UXB0 335 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 C9orf139Q6ZV77 190 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 OR52I2Q8NH67 350 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 CT45A3Q8NHU0 189 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
RPA3-201ENST00000223129 YPEL1O60688 119 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 UPK1BO75841 260 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 ZBTB25P24278 435 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 DGCR2P98153 550 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 HLA-DRB5Q30154 266 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 TMEM30BQ3MIR4 351 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 PYHIN1Q6K0P9 492 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 CCDC190Q86UF4 302 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 DYNAPQ8N1N2 210 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 BEND2Q8NDZ0 799 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 ZNF596Q8TC21 504 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 MMP28Q9H239 520 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 KLK11Q9UBX7 282 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 BUB1B-PAK6H3BSN5 160 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 TPPPO94811 219 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 STEAP3Q658P3 488 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 CABLES2Q9BTV7 478 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 SCPEP1Q9HB40 452 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 FAM96BQ9Y3D0 163 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 HILPDAQ9Y5L2 63 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 V9GYH0 126 aa12.16□□□□□ -0.46
RPA3-201ENST00000223129 TRBV6-7A0A0A0MS04 114 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 SULT1C2O00338 296 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 HTR1DP28221 377 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 SSX2Q16385 188 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 LYSMD2Q8IV50 215 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 SIGLECL1Q8N7X8 197 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 OR10X1Q8NGY0 326 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 OR10J5Q8NHC4 309 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 RDH8Q9NYR8 311 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 ANAPC10Q9UM13 185 aa12.15□□□□□ -0.46
RPA3-201ENST00000223129 TBL2Q9Y4P3 447 aaKnown RBP12.15□□□□□ -0.46
RPA3-201ENST00000223129 ARPC4P59998 168 aa12.15□□□□□ -0.47
RPA3-201ENST00000223129 CD300CQ08708 224 aa12.15□□□□□ -0.47
RPA3-201ENST00000223129 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.47
RPA3-201ENST00000223129 PLA1AQ53H76 456 aa12.15□□□□□ -0.47
RPA3-201ENST00000223129 SLC25A48Q6ZT89 311 aaKnown RBP12.15□□□□□ -0.47
RPA3-201ENST00000223129 FCAMRQ8WWV6 532 aa12.15□□□□□ -0.47
RPA3-201ENST00000223129 DPM3Q9P2X0 92 aa12.15□□□□□ -0.47
RPA3-201ENST00000223129 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 RGS11O94810 467 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 NAT1P18440 290 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 HLA-DMAP28067 261 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 ZNF45Q02386 682 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 TUSC1Q2TAM9 212 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 Q3ZCU0 254 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 LINC00311Q8N616 119 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 C8orf31Q8N9H6 132 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 MALSU1Q96EH3 234 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 GINS4Q9BRT9 223 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 ABHD14AQ9BUJ0 271 aa12.14□□□□□ -0.47
RPA3-201ENST00000223129 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
RPA3-201ENST00000223129 LEUTXA8MZ59 168 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 LY6LH3BQJ8 138 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 CTDSPLO15194 276 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 RBBP9O75884 186 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 PMP2P02689 132 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 FBP1P09467 338 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 NFYAP23511 347 aaPredicted RBP12.13□□□□□ -0.47
RPA3-201ENST00000223129 RFX2P48378 723 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 SCGB2A2Q13296 93 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 ZNF79Q15937 498 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 OR5AP2Q8NGF4 316 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 ZDHHC16Q969W1 377 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 ABCB10Q9NRK6 738 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 MTFP1Q9UDX5 166 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 RNF150Q9ULK6 438 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 MINOS1-NBL1R4GNA1 71 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 CTXN2P0C2S0 81 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 PYDC2Q56P42 97 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 SMIM4Q8WVI0 70 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 ABHD14BQ96IU4 210 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 RABL2AQ9UBK7 228 aaPredicted RBP12.13□□□□□ -0.47
RPA3-201ENST00000223129 RABL2BQ9UNT1 228 aa12.13□□□□□ -0.47
RPA3-201ENST00000223129 LANCL1O43813 399 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 PTTG1O95997 202 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 RCVRNP35243 200 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 ETV6P41212 452 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 RAB13P51153 203 aa12.12□□□□□ -0.47
RPA3-201ENST00000223129 MRPS10P82664 201 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms