RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 CT45A7P0DMV0 189 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 POLR2JP52435 117 aaKnown RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 NRF1Q16656 503 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 CT45A1Q5HYN5 189 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 LCN12Q6JVE5 192 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 TMEM205Q6UW68 189 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 C10orf111Q8N326 155 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 MFSD8Q8NHS3 518 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 CT45A3Q8NHU0 189 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 SRSF12Q8WXF0 261 aaKnown RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 RGP1Q92546 391 aaPredicted RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 ZNF382Q96SR6 550 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 DPY30Q9C005 99 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 LSM5Q9Y4Y9 91 aaKnown RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 SDK2Q58EX2 2172 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 GPR6P46095 362 aaPredicted RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 CKS1BP61024 79 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 RPL18AQ02543 176 aaKnown RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 RGNQ15493 299 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 SMIM21Q3B7S5 101 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 TRMT12Q53H54 448 aaKnown RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 SAMD13Q5VXD3 122 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 IDO2Q6ZQW0 420 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 CBR4Q8N4T8 237 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 METTL27Q8N6F8 245 aaPredicted RBP6.82□□□□□ -1.32
VSIG1-201ENST00000217957 OR10A6Q8NH74 314 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 BMFQ96LC9 184 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 OR52E6Q96RD3 313 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 NEUROG3Q9Y4Z2 214 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 V9GY05 133 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 MED12Q93074 2177 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 PIEZO2Q9H5I5 2752 aa6.82□□□□□ -1.32
VSIG1-201ENST00000217957 A0A1B0GWB2 263 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 K7EQD1 137 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 C8GP07360 202 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 HKR1P10072 659 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 OR3A4PP47883 348 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 RAB25P57735 213 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 ZNF616Q08AN1 781 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 C16orf72Q14CZ0 275 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 ZNF630Q2M218 657 aaPredicted RBP6.81□□□□□ -1.32
VSIG1-201ENST00000217957 FAM71E1Q6IPT2 247 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 UFSP1Q6NVU6 142 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 PAMR1Q6UXH9 720 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 LINC01555Q8NAE3 123 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 ZNF485Q8NCK3 441 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 OR4F15Q8NGB8 312 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 OR51E2Q9H255 320 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 HELZP42694 1942 aaKnown RBP6.81□□□□□ -1.32
VSIG1-201ENST00000217957 NBASA2RRP1 2371 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 ATMQ13315 3056 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 C15orf61A6NNL5 157 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 FOXI3A8MTJ6 420 aaPredicted RBP6.81□□□□□ -1.32
VSIG1-201ENST00000217957 H2AFB1P0C5Y9 115 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 PRDX4Q13162 271 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 MPPED2Q15777 294 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 SVOPLQ8N434 492 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 MAL2Q969L2 176 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 PRORYQ9H606 182 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 PSG8Q9UQ74 426 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 ZNF318Q5VUA4 2279 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 DMXL2Q8TDJ6 3036 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 TECTAO75443 2155 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 F5H5K5 113 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 SOX14O95416 240 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 CTSEP14091 401 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 TNFRSF1BP20333 461 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 RPL29P47914 159 aaKnown RBP6.81□□□□□ -1.32
VSIG1-201ENST00000217957 LPCAT3Q6P1A2 487 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 LCN9Q8WX39 176 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 ZNF257Q9Y2Q1 563 aa6.81□□□□□ -1.32
VSIG1-201ENST00000217957 MAP1LC3B2A6NCE7 125 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 E9PLD3 99 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 LAMP1P11279 417 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 CA6P23280 308 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 DEFB133Q30KQ1 61 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 TMEM128Q5BJH2 165 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 KDM4DQ6B0I6 523 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 SLC22A18ASQ8N1D0 253 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 C6orf223Q8N319 242 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 PIFOQ8TCI5 191 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.8□□□□□ -1.32
VSIG1-201ENST00000217957 RPUSD4Q96CM3 377 aaKnown RBP6.8□□□□□ -1.32
VSIG1-201ENST00000217957 BTF3L4Q96K17 158 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 MARVELD1Q9BSK0 173 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 MAP1LC3BQ9GZQ8 125 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 CCDC88CQ9P219 2028 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 CD99P14209 185 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 VDAC2P45880 294 aaPredicted RBP6.8□□□□□ -1.32
VSIG1-201ENST00000217957 SLC16A13Q7RTY0 426 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 FAM220AQ7Z4H9 259 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 OR9G1Q8NH87 305 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 NABP1Q96AH0 204 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 SEC22AQ96IW7 307 aa6.8□□□□□ -1.32
VSIG1-201ENST00000217957 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
VSIG1-201ENST00000217957 TNFSF12O43508 249 aa6.79□□□□□ -1.32
VSIG1-201ENST00000217957 SYNGR1O43759 233 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms