RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ATXN7O15265 892 aaPredicted RBP14.52□□□□□ -0.09
VRK1-201ENST00000216639 GPR137BO60478 399 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 SLC25A6P12236 298 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 EDDM3BP56851 147 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 CATR1Q13166 79 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 STUMQ69YW2 141 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 LRRC20Q8TCA0 184 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 EDARADDQ8WWZ3 215 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 FAM234AQ9H0X4 552 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 ZNF665Q9H7R5 613 aa14.52□□□□□ -0.09
VRK1-201ENST00000216639 RCL1Q9Y2P8 373 aaKnown RBP14.52□□□□□ -0.09
VRK1-201ENST00000216639 BSNQ9UPA5 3926 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 SHISA9B4DS77 424 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 PPP1CCP36873 323 aaKnown RBP14.51□□□□□ -0.09
VRK1-201ENST00000216639 TEX36Q5VZQ5 186 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 EIF5AL1Q6IS14 154 aaKnown RBP14.51□□□□□ -0.09
VRK1-201ENST00000216639 C1orf87Q8N0U7 546 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 RFESDQ8TAC1 157 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 LSM10Q969L4 123 aaKnown RBP14.51□□□□□ -0.09
VRK1-201ENST00000216639 C14orf79Q96F83 325 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 SAP30LQ9HAJ7 183 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 JPT1Q9UK76 154 aa14.51□□□□□ -0.09
VRK1-201ENST00000216639 A0A1B0GU03 582 aa14.5□□□□□ -0.09
VRK1-201ENST00000216639 FAM201AQ5SY85 155 aa14.5□□□□□ -0.09
VRK1-201ENST00000216639 MS4A5Q9H3V2 200 aa14.5□□□□□ -0.09
VRK1-201ENST00000216639 DYNLRB1Q9NP97 96 aa14.5□□□□□ -0.09
VRK1-201ENST00000216639 RNF150Q9ULK6 438 aa14.5□□□□□ -0.09
VRK1-201ENST00000216639 NKX6-3A6NJ46 265 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 WRBO00258 174 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 JTBO76095 146 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 APOBEC3AP31941 199 aaPredicted RBP14.49□□□□□ -0.09
VRK1-201ENST00000216639 VAMP2P63027 116 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 TCTEX1D1Q8N7M0 179 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 KDF1Q8NAX2 398 aaPredicted RBP14.49□□□□□ -0.09
VRK1-201ENST00000216639 DEFB108BQ8NET1 73 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 DCTN5Q9BTE1 182 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 GNG12Q9UBI6 72 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 CADP27708 2225 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 TRAV38-1A0A0B4J264 116 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.49□□□□□ -0.09
VRK1-201ENST00000216639 E7EQL1 145 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 ATG12O94817 140 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 GAPDHP04406 335 aaKnown RBP14.49□□□□□ -0.09
VRK1-201ENST00000216639 MMP9P14780 707 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 AKR1C2P52895 323 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 TMEM33P57088 247 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 FAM74A1Q5RGS3 127 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 DMRTC2Q8IXT2 367 aaPredicted RBP14.49□□□□□ -0.09
VRK1-201ENST00000216639 DMBX1Q8NFW5 382 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 CA5BP1Q8WTZ4 195 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 CXorf58Q96LI9 332 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 GAFA1Q96PS6 74 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 FBXL17Q9UF56 701 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 SESN1Q9Y6P5 492 aa14.49□□□□□ -0.09
VRK1-201ENST00000216639 CEP295Q9C0D2 2601 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 IGHV3-43A0A0B4J1X8 118 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 YPEL1O60688 119 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 IGHV3-43DP0DP04 118 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 ID3Q02535 119 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 EFNB3Q15768 340 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 ZNF66Q6ZN08 573 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 ZNF788Q6ZQV5 615 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 ZNF808Q8N4W9 903 aaPredicted RBP14.48□□□□□ -0.09
VRK1-201ENST00000216639 LINC01560Q8TB33 94 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 GPR146Q96CH1 333 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 YPEL2Q96QA6 119 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 KCNJ16Q9NPI9 418 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 FAM212BQ9NTI7 297 aaPredicted RBP14.48□□□□□ -0.09
VRK1-201ENST00000216639 ATMQ13315 3056 aa14.48□□□□□ -0.09
VRK1-201ENST00000216639 TRGV10A0A0A0MS01 117 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 BORCS7-ASMTA0A0B4J1R7 106 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 B9A039 149 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 LGALS8O00214 317 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 F2RL2O00254 374 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 GYPAP02724 150 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 EPHA1P21709 976 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 POLR2GP62487 172 aaKnown RBP eCLIP14.47□□□□□ -0.09
VRK1-201ENST00000216639 ADORA2A-AS1P86434 159 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 AANATQ16613 207 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 LTC4SQ16873 150 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 RNF141Q8WVD5 230 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 CCL13Q99616 98 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 SLC25A31Q9H0C2 315 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 CALYQ9NYX4 217 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 PSG11Q9UQ72 335 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 RNF115Q9Y4L5 304 aa14.47□□□□□ -0.09
VRK1-201ENST00000216639 DEFB108AA8MXU0 73 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 SIGLEC5O15389 551 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 SSSCA1O60232 199 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 LY6DQ14210 128 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 MORN2Q502X0 79 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 ZNF585BQ52M93 769 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 CXorf66Q5JRM2 361 aaPredicted RBP14.46□□□□□ -0.09
VRK1-201ENST00000216639 RPL7L1Q6DKI1 246 aaKnown RBP14.46□□□□□ -0.09
VRK1-201ENST00000216639 OR2C3Q8N628 320 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 HSD17B10Q99714 261 aaKnown RBP14.46□□□□□ -0.09
VRK1-201ENST00000216639 SDHAF2Q9NX18 166 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 PIEZO1Q92508 2521 aa14.46□□□□□ -0.09
VRK1-201ENST00000216639 PPIAL4EA0A075B759 164 aa14.46□□□□□ -0.1
VRK1-201ENST00000216639 MEX3AA1L020 520 aaKnown RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms