RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 REPIN1Q9BWE0 567 aaKnown RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 KIAA1549Q9HCM3 1950 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 F2RP25116 425 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 MEOX1P50221 254 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 ZNF787Q6DD87 383 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 SPSB3Q6PJ21 355 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 SLC25A31Q9H0C2 315 aa12.82□□□□□ -0.36
EFNB1-201ENST00000204961 UNKLQ9H9P5 680 aaKnown RBP12.82□□□□□ -0.36
EFNB1-201ENST00000204961 ANKRD11Q6UB99 2663 aaPredicted RBP12.81□□□□□ -0.36
EFNB1-201ENST00000204961 IFITM10A6NMD0 228 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 PPIHO43447 177 aaKnown RBP12.81□□□□□ -0.36
EFNB1-201ENST00000204961 CER1O95813 267 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 SNRPCP09234 159 aaKnown RBP12.81□□□□□ -0.36
EFNB1-201ENST00000204961 ECI1P42126 302 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 CCL11P51671 97 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 VKORC1L1Q8N0U8 176 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 ZDHHC16Q969W1 377 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 ADGRG7Q96K78 797 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 SNX22Q96L94 193 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 DUSP13Q9UII6 198 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 CYTIPO60759 359 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 SERPINA7P05543 415 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 SELLP14151 372 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 FGF12P61328 243 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 CEACAM21Q3KPI0 293 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 APOBEC3DQ96AK3 386 aaPredicted RBP12.81□□□□□ -0.36
EFNB1-201ENST00000204961 WDYHV1Q96HA8 205 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 EGLN1Q9GZT9 426 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 GFOD1Q9NXC2 390 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 GAB2Q9UQC2 676 aa12.81□□□□□ -0.36
EFNB1-201ENST00000204961 A0A1W2PNU3 283 aaPredicted RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 ZNF729A6NN14 1252 aaPredicted RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 NDUFB7P17568 137 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 LHX2P50458 406 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 RNFT1Q5M7Z0 435 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 LEAP2Q969E1 77 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 SCRT1Q9BWW7 348 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 LYRM2Q9NU23 88 aaPredicted RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 B4GALT7Q9UBV7 327 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 ATRXP46100 2492 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 TNFSF15O95150 251 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 CRYAAP02489 173 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 GFRA1P56159 465 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 NKX6-1P78426 367 aaPredicted RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 TMEM42Q69YG0 159 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 NTN3O00634 580 aaPredicted RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 OR2H2O95918 312 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 OPN1MWP04001 364 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 OPN1MW2P0DN77 364 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 OPN1MW3P0DN78 364 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 CASP6P55212 293 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 CLDN18P56856 261 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 EIF3IQ13347 325 aaKnown RBP12.8□□□□□ -0.36
EFNB1-201ENST00000204961 DCAF10Q5QP82 559 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 C1orf210Q8IVY1 113 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
EFNB1-201ENST00000204961 COL12A1Q99715 3063 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 IFNL4K9M1U5 179 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 PHOX2AO14813 284 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 CDS2O95674 445 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 S100GP29377 79 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 IL2RGP31785 369 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 PMELP40967 661 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 PAX9P55771 341 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 ICAM4Q14773 271 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 OR2D2Q9H210 308 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 SH2D2AQ9NP31 389 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 ATP23Q9Y6H3 246 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 OTOGLQ3ZCN5 2332 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 TANC2Q9HCD6 1990 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 ADAMTS20P59510 1910 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
EFNB1-201ENST00000204961 CD200P41217 278 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 HMGN3Q15651 99 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 OR4C12Q96R67 309 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 ZNF703Q9H7S9 590 aaPredicted RBP12.79□□□□□ -0.36
EFNB1-201ENST00000204961 OR2W1Q9Y3N9 320 aa12.79□□□□□ -0.36
EFNB1-201ENST00000204961 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 LNP1A1A4G5 178 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 OR5H1A6NKK0 313 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 PPP1R2P9O14990 202 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 IGKV1-39P01597 117 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 IGKV1D-39P04432 117 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 KIR2DS4P43632 304 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 SSPNQ14714 243 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 KIR2DS1Q14954 304 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 ABLIM2Q6H8Q1 611 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 LHX4Q969G2 390 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
EFNB1-201ENST00000204961 CLEC18AA5D8T8 446 aa12.78□□□□□ -0.36
EFNB1-201ENST00000204961 SOD3P08294 240 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms