RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.37
TMEM38A-201ENST00000187762 CDAP32320 146 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 PAX9P55771 341 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 ID3Q02535 119 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 MYBPHQ13203 477 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 FAM69BQ5VUD6 431 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 TCF23Q7RTU1 214 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF695Q8IW36 515 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 UEVLDQ8IX04 471 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 Q8N976 141 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 RNF2Q99496 336 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 TMEM222Q9H0R3 208 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 FBXL7Q9UJT9 491 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 RNF114Q9Y508 228 aa12.71□□□□□ -0.38
TMEM38A-201ENST00000187762 TRAV34A0A0B4J273 112 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 VSTM2BA6NLU5 285 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 MPLP40238 635 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 NPBWR2P48146 333 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF133P52736 654 aaPredicted RBP12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 CARD17Q5XLA6 110 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 MCEMP1Q8IX19 187 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 OR5T1Q8NG75 326 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 SCGB1C1Q8TD33 95 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 LOXL4Q96JB6 756 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 BTF3L4Q96K17 158 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 RBM24Q9BX46 236 aaKnown RBP12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 CST9LQ9H4G1 147 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 MOB1AQ9H8S9 216 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 A0A1W2PNR3 127 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 MPPED1O15442 326 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 BMP5P22003 454 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF814B7Z6K7 855 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 MMP23AO75900 390 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 TNFSF4P23510 183 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 TESK1Q15569 626 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 RHBDD2Q6NTF9 364 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 SAXO1Q8IYX7 474 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 SELENOHQ8IZQ5 122 aaKnown RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 OR10G3Q8NGC4 313 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 LHX4Q969G2 390 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 SAMD10Q9BYL1 202 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 ALKBH4Q9NXW9 302 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 BET1LQ9NYM9 111 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 UBE2J1Q9Y385 318 aaPredicted RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 RBM7Q9Y580 266 aaKnown RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 RTTNQ86VV8 2226 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 H3BP45 60 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 ZNF121P58317 390 aaPredicted RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 KRTDAPP60985 99 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 TMEM267Q0VDI3 215 aaPredicted RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 FFAR4Q5NUL3 377 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 STARD4Q96DR4 205 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 TMEM56Q96MV1 263 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 PSMG3Q9BT73 122 aaPredicted RBP12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 ZDHHC11Q9H8X9 412 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 POLR1DQ9Y2S0 133 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 LHFPL6Q9Y693 200 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 TMEM56-RWDD3S4R434 201 aa12.69□□□□□ -0.38
TMEM38A-201ENST00000187762 VPS13AQ96RL7 3174 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 HS3ST1O14792 307 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 WNT2P09544 360 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 DTYMKP23919 212 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 LHX2P50458 406 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 MLF1P58340 268 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 GPR146Q96CH1 333 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 WDR1O75083 606 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 VENTXO95231 258 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 PSMB3P49720 205 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 CLRN1P58418 232 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 YPEL3P61236 119 aaPredicted RBP12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 DOK3Q7L591 496 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 OR4F5Q8NH21 305 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 PSMF1Q92530 271 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 Q96M66 194 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 OR4F4Q96R69 305 aa12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 PTRH2Q9Y3E5 179 aaKnown RBP12.68□□□□□ -0.38
TMEM38A-201ENST00000187762 FCGR2AP12318 317 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 CCL1P22362 96 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 PTGDSP41222 190 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 HERV-K104P61576 105 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 WDR74Q6RFH5 385 aaPredicted RBP12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 MYPOPQ86VE0 399 aaPredicted RBP12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 DYRK2Q92630 601 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 LIN37Q96GY3 246 aaPredicted RBP12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 SLC39A9Q9NUM3 307 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 ELOVL5Q9NYP7 299 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 KLHL13Q9P2N7 655 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 NPIPB13A6NJU9 1138 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 NPIPB4C9JG80 1138 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 CRISP2P16562 243 aa12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 SUMO3P55854 103 aaPredicted RBP12.67□□□□□ -0.38
TMEM38A-201ENST00000187762 VAMP3Q15836 100 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms