RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FAM219AQ8IW50 185 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 OR1L1Q8NH94 360 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GAFA1Q96PS6 74 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 NAA60Q9H7X0 242 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 METTL8Q9H825 291 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TMEM106BQ9NUM4 274 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 HOXB5P09067 269 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 LYL1P12980 280 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 SSTR5P35346 364 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 C1orf87Q8N0U7 546 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ZNF565Q8N9K5 539 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GALMQ96C23 342 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GALNT14Q96FL9 552 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 C2orf50Q96LR7 162 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 DCTN5Q9BTE1 182 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 SLC5A7Q9GZV3 580 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 BARX1Q9HBU1 254 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 OR5AC2Q9NZP5 309 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 LRRK2Q5S007 2527 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 UTP20O75691 2785 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 UBR5O95071 2799 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ODAMA1E959 279 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 F5H0A9 414 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 C19orf84I3L1E1 186 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 HBZP02008 142 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ZP3P21754 424 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 LURAP1Q96LR2 239 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CCL13Q99616 98 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 DNTTIP1Q9H147 329 aa16.38■□□□□ 0.21
TNFRSF1A-201ENST00000162749 MSGN1A6NI15 193 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 LGALS8O00214 317 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PRSS54Q6PEW0 395 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 HSD17B13Q7Z5P4 300 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 BVESQ8NE79 360 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PHYHIPLQ96FC7 376 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PARP12Q9H0J9 701 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ZNF665Q9H7R5 613 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CCL28Q9NRJ3 127 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 NUP50Q9UKX7 468 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 OR5AC1P0C628 307 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CEACAM6P40199 344 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 RAB32Q13637 225 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 FAM216BQ8N7L0 139 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CCDC71LQ8N9Z2 235 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 OR5D13Q8NGL4 314 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 KCNIP3Q9Y2W7 256 aa16.37■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TACC2O95359 2948 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TRAV38-1A0A0B4J264 116 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GPR31O00270 319 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 IL2RGP31785 369 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 EDDM3BP56851 147 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TUSC1Q2TAM9 212 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 SP6Q3SY56 376 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 EIF4E3Q8N5X7 224 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CYTL1Q9NRR1 136 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CHD6Q8TD26 2715 aa16.36■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PPIAL4EA0A075B759 164 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 IGHV1-69-2A0A0G2JMI3 117 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PPIAL4DF5H284 164 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 C15orf65H3BRN8 121 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 SIGLEC5O15389 551 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TMPRSS2O15393 492 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PPIAL4FP0DN26 164 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 FAM185AQ8N0U4 392 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 OR10V1Q8NGI7 309 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ARL11Q969Q4 196 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PPIAL4AQ9Y536 164 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 A0A1W2PPR1 153 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 HSD17B6O14756 317 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 MPPED1O15442 326 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 IGFBP2P18065 325 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 RND3P61587 244 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TMEM187Q14656 261 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CR1LQ2VPA4 569 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 FAM53AQ6NSI3 398 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TRAT1Q6PIZ9 186 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 STOML3Q8TAV4 291 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GLYATL2Q8WU03 294 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GPHA2Q96T91 129 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 FAM234AQ9H0X4 552 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GSKIPQ9P0R6 139 aa16.35■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CRYBG3Q68DQ2 2970 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 PPOXP50336 477 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 OR52L2PQ8NGH6 319 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 RFESDQ8TAC1 157 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 SESN1Q9Y6P5 492 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ASH1LQ9NR48 2969 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 IGLV2-14P01704 120 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GZMHP20718 246 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 NUP62P37198 522 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GNMTQ14749 295 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TBC1D26Q86UD7 250 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 CMTM1Q8IZ96 169 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TP53RKQ96S44 253 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 SUCNR1Q9BXA5 334 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 FAM208BQ5VWN6 2430 aa16.34■□□□□ 0.21
TNFRSF1A-201ENST00000162749 MSI2Q96DH6 328 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 AQP10Q96PS8 301 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 TOLLIPQ9H0E2 274 aa16.33■□□□□ 0.2
TNFRSF1A-201ENST00000162749 NCOR1P1Q9H4R4 102 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms