RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ASCL1P50553 236 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 SRSF3P84103 164 aaKnown RBP6.93□□□□□ -1.3
VAMP3-201ENST00000054666 EDDM3AQ14507 147 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 MSMO1Q15800 293 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF808Q8N4W9 903 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-201ENST00000054666 LFNGQ8NES3 379 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 OR2G3Q8NGZ4 309 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 FAM213BQ8TBF2 198 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 LURAP1Q96LR2 239 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 OR2V2Q96R30 315 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 ATP5SQ99766 215 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 LRFN3Q9BTN0 628 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 PBDC1Q9BVG4 233 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 CACFD1Q9UGQ2 172 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 RNF115Q9Y4L5 304 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 WSB1Q9Y6I7 421 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 PRR14LQ5THK1 2151 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 KIAA2026Q5HYC2 2103 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 H3BP45 60 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 K7EM74 188 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 SYNGR2O43760 224 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 IFNA5P01569 189 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 ATP6V0CP27449 155 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 PRDX2P32119 198 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 SSTR5P35346 364 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 GLIPR1P48060 266 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 SULT1A1P50225 295 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 PAX5Q02548 391 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 GUCA2BQ16661 112 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 C10orf91Q5T1B1 145 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 PUSL1Q8N0Z8 303 aaKnown RBP6.93□□□□□ -1.3
VAMP3-201ENST00000054666 OR52L2PQ8NGH6 319 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 LYPD6BQ8NI32 183 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM171Q8WVE6 324 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 TCTEX1D2Q8WW35 142 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 EDARADDQ8WWZ3 215 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 MEGF10Q96KG7 1140 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 TOLLIPQ9H0E2 274 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 ESRP2Q9H6T0 727 aaKnown RBP6.93□□□□□ -1.3
VAMP3-201ENST00000054666 METRNQ9UJH8 293 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 LAMP3Q9UQV4 416 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 ASPMQ8IZT6 3477 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 FAM90A26D6RGX4 464 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 ATP6V1G2-DDX39BF2Z307 99 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 SPRY3O43610 288 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 IGKV1-5P01602 117 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TFF1P04155 84 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 ADH4P08319 380 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 PPP1CCP36873 323 aaKnown RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 SNCAP37840 140 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 ID4P47928 161 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 HBG1P69891 147 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 HBG2P69892 147 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 NKX6-1P78426 367 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 HOXA4Q00056 320 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 FOXC1Q12948 553 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 PEA15Q15121 130 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF585BQ52M93 769 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 AKR1C8PQ5T2L2 129 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 MOGAT3Q86VF5 341 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 LRP11Q86VZ4 500 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 CD177Q8N6Q3 437 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TCTEX1D1Q8N7M0 179 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TPRX1Q8N7U7 411 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 OR13A1Q8NGR1 328 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 SNX22Q96L94 193 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 RAB9BQ9NP90 201 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 PLA2G2EQ9NZK7 142 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 RNF150Q9ULK6 438 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TP53TG5Q9Y2B4 290 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 MMP24Q9Y5R2 645 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 KPTNQ9Y664 436 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 CHD3Q12873 2000 aaKnown RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 DMXL1Q9Y485 3027 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 A8MXE2 369 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 K7N7A8 449 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 DNASE2O00115 360 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TOR1AO14656 332 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 MGST3O14880 152 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TXNL1O43396 289 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 C1QL1O75973 258 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM50AO95807 157 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 CD5P06127 495 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 IAPPP10997 89 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 EGR1P18146 543 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TNFSF4P23510 183 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 CFHR2P36980 270 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 PPT1P50897 306 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM267Q0VDI3 215 aaPredicted RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 GUK1Q16774 197 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 MSMPQ1L6U9 139 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 IZUMO4Q1ZYL8 232 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 MRGPRGQ86SM5 289 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 FAM216AQ8WUB2 273 aa6.92□□□□□ -1.3
VAMP3-201ENST00000054666 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 EIF5A2Q9GZV4 153 aaKnown RBP6.92□□□□□ -1.3
VAMP3-201ENST00000054666 COA4Q9NYJ1 87 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms