RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 STXBP6Q8NFX7 210 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 STARD4Q96DR4 205 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 ZNF729A6NN14 1252 aaPredicted RBP9.53□□□□□ -0.88
RGPD5-201ENST00000016946 OR1L1Q8NH94 360 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 NEU4Q8WWR8 484 aaPredicted RBP9.53□□□□□ -0.88
RGPD5-201ENST00000016946 ZNF154Q13106 437 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 PCSK4Q6UW60 755 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 ABHD12Q8N2K0 398 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 C9orf106Q8NAJ2 232 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 FLVCR1-AS1Q8TAF5 88 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 FAM222BQ8WU58 562 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 RNASE6Q93091 150 aaKnown RBP9.53□□□□□ -0.88
RGPD5-201ENST00000016946 PERPQ96FX8 193 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 DYNLT3P51808 116 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 KLF9Q13886 244 aaPredicted RBP9.53□□□□□ -0.88
RGPD5-201ENST00000016946 ZNF429Q86V71 674 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 CALHM1Q8IU99 346 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 G6PC2Q9NQR9 355 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 TMEM106BQ9NUM4 274 aa9.53□□□□□ -0.88
RGPD5-201ENST00000016946 PTGDSP41222 190 aa9.52□□□□□ -0.88
RGPD5-201ENST00000016946 B2MP61769 119 aa9.52□□□□□ -0.88
RGPD5-201ENST00000016946 C10orf113Q5VZT2 155 aa9.52□□□□□ -0.88
RGPD5-201ENST00000016946 LILRB1Q8NHL6 650 aaPredicted RBP9.52□□□□□ -0.88
RGPD5-201ENST00000016946 LOC390937A0A1W2PQ73 354 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
RGPD5-201ENST00000016946 ZNF737O75373 536 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 ID1P41134 155 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 TMEM30BQ3MIR4 351 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 IGHV3-21A0A0B4J1V1 117 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 TMEM50BP56557 158 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 CLEC7AQ9BXN2 247 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 PLSCR3Q9NRY6 295 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 LOC285556D6RIA3 1793 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 LINC00271P0C7V0 271 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 CLDN18P56856 261 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 GHITMQ9H3K2 345 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 RNASEK-C17orf49H0YIS7 233 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 PSG5Q15238 335 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 JPT1Q9UK76 154 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 KCNK7Q9Y2U2 307 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 GOLT1BQ9Y3E0 138 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 NUP214P35658 2090 aaPredicted RBP9.52□□□□□ -0.89
RGPD5-201ENST00000016946 RP1P56715 2156 aa9.52□□□□□ -0.89
RGPD5-201ENST00000016946 E9PLN8 166 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 LMX1BO60663 402 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 OR2J3O76001 311 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 SCTP09683 121 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 ZNF273Q14593 569 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 VAX1Q5SQQ9 334 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 C17orf82Q86X59 251 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 SLC24A4Q8NFF2 622 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 OR4P4Q8NGL7 312 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 MEGF10Q96KG7 1140 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 VKORC1Q9BQB6 163 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 HOXA4Q00056 320 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 ALX3O95076 343 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 GALR1P47211 349 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 LY6EQ16553 131 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 DHRS7BQ6IAN0 325 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 PNKDQ8N490 385 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 ZNF561Q8N587 486 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 OR5P3Q8WZ94 311 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 CACNA1HO95180 2353 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 TRBV5-7A0A0A0MS05 114 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 MBPP02686 304 aaPredicted RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 TMEM186Q96B77 213 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 TDRD15B5MCY1 1934 aaKnown RBP9.51□□□□□ -0.89
RGPD5-201ENST00000016946 OR4D10Q8NGI6 311 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 SCMH1Q96GD3 660 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 IGHV2OR16-5A0A0B4J2B6 119 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 ANKRD55Q3KP44 614 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 TEX261Q6UWH6 196 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 DEPPQ9NTK1 212 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 U3KQ87 197 aa9.51□□□□□ -0.89
RGPD5-201ENST00000016946 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 HSF4Q9ULV5 492 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 HMSDA8MTL9 139 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 CORTO00230 105 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 TBX6O95947 436 aaPredicted RBP9.5□□□□□ -0.89
RGPD5-201ENST00000016946 GLIPR1P48060 266 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 LINC00052Q96N35 136 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 MED19A0JLT2 244 aaPredicted RBP9.5□□□□□ -0.89
RGPD5-201ENST00000016946 NEURL1O76050 574 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 SLC25A53Q5H9E4 307 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 FDX2Q6P4F2 183 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 FAM168AQ92567 244 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 HTN1P15515 57 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 FGF8P55075 233 aaPredicted RBP9.5□□□□□ -0.89
RGPD5-201ENST00000016946 EWSR1Q01844 656 aaKnown RBP eCLIP9.5□□□□□ -0.89
RGPD5-201ENST00000016946 UBE2V2Q15819 145 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 PHYHIPLQ96FC7 376 aa9.5□□□□□ -0.89
RGPD5-201ENST00000016946 TLNRD1Q9H1K6 362 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms