RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	SERPINA7	P05543	415 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	SERPINE2	P07093	398 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	CDPF1	Q6NVV7	123 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	SPNS3	Q6ZMD2	512 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	TMEM105	Q8N8V8	129 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	OR10J5	Q8NHC4	309 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	NIPSNAP3B	Q9BS92	247 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	SMOC1	Q9H4F8	434 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	DNAJC13	O75165	2243 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	FAM166B	A8MTA8	275 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	SLC31A2	O15432	143 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	IAPP	P10997	89 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	TAS2R60	P59551	318 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZNF726P1	Q15940	193 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	PRR18	Q8N4B5	295 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	RBMXL1	Q96E39	390 aa	Known RBP	11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	THOC3	Q96J01	351 aa	Known RBP	11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2AA	Q96QV6	131 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	SSX3	Q99909	188 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	TOLLIP	Q9H0E2	274 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIPK2	Q9H2X6	1198 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZNF665	Q9H7R5	613 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	DLL3	Q9NYJ7	618 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	CACNG5	Q9UF02	275 aa		11.75	□□□□□ -0.53
PHGDH-233	ENST00000642021	LOC102723971	A0A1B0GUV8	181 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	IGHE	P01854	428 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	WNT5A	P41221	380 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	GLIPR1	P48060	266 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	FGF8	P55075	233 aa	Predicted RBP	11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	KHDC3L	Q587J8	217 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	PYY3	Q5JQD4	70 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	FAM90A2P	Q658T7	463 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	LCN15	Q6UWW0	184 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	HAPLN4	Q86UW8	402 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	OR2M7	Q8NG81	312 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	RIMS4	Q9H426	269 aa	Predicted RBP	11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021		A0A1B0GU03	582 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZFP92	A6NM28	416 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	IGKV1-5	P01602	117 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	METTL15P1	P0C7V9	234 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	CDX1	P47902	265 aa	Predicted RBP	11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	DUSP3	P51452	185 aa	Predicted RBP	11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	OR8G1	Q15617	311 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	C3AR1	Q16581	482 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	DCAF12	Q5T6F0	453 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	GFI1B	Q5VTD9	330 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	SLC25A24	Q6NUK1	477 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZNF880	Q6PDB4	577 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	FAM58A	Q8N1B3	248 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	PPP1R3C	Q9UQK1	317 aa		11.74	□□□□□ -0.53
PHGDH-233	ENST00000642021	CYB5B	O43169	146 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BK	O60814	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	TRGC2	P03986	189 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BJ	P06899	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BO	P23527	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BB	P33778	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	MAGEA5	P43359	124 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BD	P58876	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	RAB11A	P62491	216 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BC	P62807	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HLA-DRB3	P79483	266 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST2H2BE	Q16778	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	OR2B11	Q5JQS5	317 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	OR2T2	Q6IF00	324 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	CLEC2A	Q6UVW9	174 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BH	Q93079	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BN	Q99877	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HIST1H2BM	Q99879	126 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	BOK	Q9UMX3	212 aa	Predicted RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	DFFB	O76075	338 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	IFNA5	P01569	189 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	CA6	P23280	308 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	TESK1	Q15569	626 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	SPATA46	Q5T0L3	261 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	NUFIP2	Q7Z417	695 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	SLC35E3	Q7Z769	313 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	VASH2	Q86V25	355 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZNF610	Q8N9Z0	462 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	URB1	O60287	2271 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	TRBV6-6	A0A0A6YYG2	114 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	TRAV1-1	A0A0B4J248	108 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	HBE1	P02100	147 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	CD200	P41217	278 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	ZNF585B	Q52M93	769 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	OR10V1	Q8NGI7	309 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	RNASE11	Q8TAA1	199 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	RAB40C	Q96S21	281 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	PLA2G3	Q9NZ20	509 aa		11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.73	□□□□□ -0.53
PHGDH-233	ENST00000642021		A0A1W2PR80	420 aa		11.72	□□□□□ -0.53
PHGDH-233	ENST00000642021		B4E171	279 aa		11.72	□□□□□ -0.53
PHGDH-233	ENST00000642021	SYNGR2	O43760	224 aa		11.72	□□□□□ -0.53
PHGDH-233	ENST00000642021	CNOT4	O95628	575 aa	Known RBP	11.72	□□□□□ -0.53
PHGDH-233	ENST00000642021	TDGF1	P13385	188 aa		11.72	□□□□□ -0.53
PHGDH-233	ENST00000642021	GNG10	P50151	68 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms