RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SSX5O60225 188 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 MELTFP08582 738 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 SCTP09683 121 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 CD34P28906 385 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 S100A5P33763 92 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 PRSS3P35030 304 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 LOXL3P58215 753 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 HTD2P86397 168 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 UTF1Q5T230 341 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 FAM53AQ6NSI3 398 aaPredicted RBP12.38□□□□□ -0.43
PAX6-268ENST00000640287 CNIH2Q6PI25 160 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 GCDHQ92947 438 aaPredicted RBP12.38□□□□□ -0.43
PAX6-268ENST00000640287 NXF2Q9GZY0 626 aaKnown RBP12.38□□□□□ -0.43
PAX6-268ENST00000640287 IFT46Q9NQC8 304 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 SLC23A1Q9UHI7 598 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 JPT1Q9UK76 154 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 PSG11Q9UQ72 335 aa12.38□□□□□ -0.43
PAX6-268ENST00000640287 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
PAX6-268ENST00000640287 MDFIC2A0A1B0GVS7 189 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 A0A1W2PPE3 182 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 RGS11O94810 467 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 IFNA2P01563 188 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 FCER2P06734 321 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 FBP1P09467 338 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 PPP1CCP36873 323 aaKnown RBP12.37□□□□□ -0.43
PAX6-268ENST00000640287 GNMTQ14749 295 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 STEAP3Q658P3 488 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 SIGLECL1Q8N7X8 197 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 OR4A4PQ8NGN8 299 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
PAX6-268ENST00000640287 MMP27Q9H306 513 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 BATF3Q9NR55 127 aa12.37□□□□□ -0.43
PAX6-268ENST00000640287 TBL2Q9Y4P3 447 aaKnown RBP12.37□□□□□ -0.43
PAX6-268ENST00000640287 A6NHS1 94 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 J3QR06 171 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 BET1O15155 118 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 HLA-DQB1P01920 261 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 GSTT2P0CG29 244 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 GSTT2BP0CG30 244 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 ZBTB25P24278 435 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 HTR1DP28221 377 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 CBX5P45973 191 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 IL18Q14116 193 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 LHFPL4Q7Z7J7 247 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 OR4P4Q8NGL7 312 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 MMP28Q9H239 520 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 AMMECR1Q9Y4X0 333 aaPredicted RBP12.36□□□□□ -0.43
PAX6-268ENST00000640287 CUBNO60494 3623 aa12.36□□□□□ -0.43
PAX6-268ENST00000640287 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 CEACAM6P40199 344 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 ARPC4P59998 168 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 SSX2Q16385 188 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 SRSF7Q16629 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
PAX6-268ENST00000640287 MORN2Q502X0 79 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 RNASE12Q5GAN4 147 aaKnown RBP12.35□□□□□ -0.43
PAX6-268ENST00000640287 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 Q6ZS49 121 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 GVQW1Q8N7I0 195 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 BEST4Q8NFU0 473 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 OR2AK2Q8NG84 335 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 OR10J5Q8NHC4 309 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 C15orf40Q8WUR7 153 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 C17orf50Q8WW18 174 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 CREB3L1Q96BA8 519 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 ZNF48Q96MX3 618 aaPredicted RBP12.35□□□□□ -0.43
PAX6-268ENST00000640287 GINS4Q9BRT9 223 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 OR1A1Q9P1Q5 309 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 NF1P21359 2839 aa12.35□□□□□ -0.43
PAX6-268ENST00000640287 IGKV1D-8A0A087WSZ0 117 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 YPEL1O60688 119 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 LPLP06858 475 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 PAX6P26367 422 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 CEACAM3P40198 252 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 Q3ZCU0 254 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 PLA1AQ53H76 456 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 HOGA1Q86XE5 327 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 ABHD14AQ9BUJ0 271 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 SCPEP1Q9HB40 452 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 ANXA10Q9UJ72 324 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 IGKV1-6A0A0C4DH72 117 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 BUB1B-PAK6H3BSN5 160 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 SLC31A2O15432 143 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 TCF21O43680 179 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 IL3RAP26951 378 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 TNFSF8P32971 234 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 BAMBIQ13145 260 aa12.34□□□□□ -0.43
PAX6-268ENST00000640287 HERPUD1Q15011 391 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms