RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SPSB1Q96BD6 273 aa8.19□□□□□ -1.1
PTP4A1-207ENST00000639568 TLCD1Q96CP7 247 aa8.19□□□□□ -1.1
PTP4A1-207ENST00000639568 DGCR6LQ9BY27 220 aa8.19□□□□□ -1.1
PTP4A1-207ENST00000639568 FBXL15Q9H469 300 aa8.19□□□□□ -1.1
PTP4A1-207ENST00000639568 TECRQ9NZ01 308 aaKnown RBP8.19□□□□□ -1.1
PTP4A1-207ENST00000639568 IGKV1-9A0A0C4DH69 117 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 H3BUA1 57 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 FCN1O00602 326 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 MAGEB4O15481 346 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 NDUFA3O95167 84 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 TMEM225BP0DP42 221 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 DBTP11182 482 aaKnown RBP8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 CTRB1P17538 263 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 ATF1P18846 271 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 CXCR4P61073 352 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 PAX5Q02548 391 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 CT45A1Q5HYN5 189 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 CTRB2Q6GPI1 263 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 CT45A3Q8NHU0 189 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 OPALINQ96PE5 141 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 SPAG4Q9NPE6 437 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 ZC4H2Q9NQZ6 224 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 SAR1AQ9NR31 198 aa8.18□□□□□ -1.1
PTP4A1-207ENST00000639568 TMEM30CPA0ZSE6 113 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 C15orf65H3BRN8 121 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 RRHO14718 337 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 ORC5O43913 435 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 HMGN1P05114 100 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 ZNF20P17024 532 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 ZNF134P52741 427 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 RPS16P62249 146 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 STEAP3Q658P3 488 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 ZNF343Q6P1L6 599 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 BVESQ8NE79 360 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 OR5T1Q8NG75 326 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 OR10V1Q8NGI7 309 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 CLCC1Q96S66 551 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 CNN2Q99439 309 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 GORASP2Q9H8Y8 452 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 RAB9BQ9NP90 201 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
PTP4A1-207ENST00000639568 SRRM2Q9UQ35 2752 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 SPINT2O43291 252 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 FOLR2P14207 255 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 SLC2A5P22732 501 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 MFAP2P55001 183 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 GINS1Q14691 196 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 TM4SF20Q53R12 229 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 ZNF562Q6V9R5 426 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 UTS2BQ765I0 119 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 GRPEL2Q8TAA5 225 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 CCDC107Q8WV48 283 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 THRSPQ92748 146 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 ADAT3Q96EY9 351 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 USMG5Q96IX5 58 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 DPCDQ9BVM2 203 aaPredicted RBP8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 TEX12Q9BXU0 123 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 MRPL20Q9BYC9 149 aaKnown RBP8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 EFCAB1Q9HAE3 211 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 TMBIM4Q9HC24 238 aa8.16□□□□□ -1.1
PTP4A1-207ENST00000639568 KIR2DL5BA0A0G2JN68 375 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 KIR2DL5BA0A0G2JPC4 375 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 LOC107986453A0A1B0GWG9 222 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 C11orf94C9JXX5 98 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 ZNF670-ZNF695F2Z2N8 137 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 KRT8P05787 483 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 PPP1R8Q12972 351 aaKnown RBP8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 KIR2DL5AQ8N109 375 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 PRR18Q8N4B5 295 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 ZNF439Q8NDP4 499 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 KIR2DL5BQ8NHK3 375 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 FGGYQ96C11 551 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 ING4Q9UNL4 249 aa8.15□□□□□ -1.1
PTP4A1-207ENST00000639568 C2orf70A6NJV1 201 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 SCAF4O95104 1147 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 UBCP0CG48 685 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 LGALS7P47929 136 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 TMEM30BQ3MIR4 351 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 ZNF57Q68EA5 555 aaPredicted RBP8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 CD300LDQ6UXZ3 194 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 NR2C2APQ86WQ0 139 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 SLC35F2Q8IXU6 374 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 SUMF2Q8NBJ7 301 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 NSMCE2Q96MF7 247 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 NIPSNAP1Q9BPW8 284 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 PARP12Q9H0J9 701 aaKnown RBP8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
PTP4A1-207ENST00000639568 AIPO00170 330 aa8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 SLC22A1O15245 554 aa8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 EDF1O60869 148 aaKnown RBP8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 CA2P00918 260 aa8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 P0DMU3 169 aa8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 FAM231AP0DMU4 169 aa8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 FAM231CP0DMU5 169 aa8.13□□□□□ -1.11
PTP4A1-207ENST00000639568 DEFA5Q01523 94 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms