RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PEX16Q9Y5Y5 336 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 IGHG4P01861 327 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 MAS1P04201 325 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 VDAC1P21796 283 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
SMN2-216ENST00000638794 LSAMPQ13449 338 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 OR5M8Q8NGP6 311 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 WWC2-AS2Q96NR7 200 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 SELENOIQ9C0D9 397 aa13.19□□□□□ -0.3
SMN2-216ENST00000638794 RAMP3O60896 148 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 SC5DO75845 299 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 IGF1P05019 195 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 VSIG8P0DPA2 414 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 SLC2A2P11168 524 aaPredicted RBP13.18□□□□□ -0.3
SMN2-216ENST00000638794 MGMTP16455 207 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 MYF6P23409 242 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 MED21Q13503 144 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 GNMTQ14749 295 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 STEAP3Q658P3 488 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 SIGIRRQ6IA17 410 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 TRAT1Q6PIZ9 186 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 LYPD6Q86Y78 171 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 GGHQ92820 318 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 Q96M66 194 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 KCTD7Q96MP8 289 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 DERL3Q96Q80 235 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 TAF9BQ9HBM6 251 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 OR2S2Q9NQN1 319 aa13.18□□□□□ -0.3
SMN2-216ENST00000638794 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
SMN2-216ENST00000638794 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 FAM90A10PA6NDY2 464 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 FAM90A7PA6NKC0 464 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 FAM90A23PA8MXZ1 464 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 LANCL1O43813 399 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 CA11O75493 328 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 CRTAPO75718 401 aaPredicted RBP13.17□□□□□ -0.3
SMN2-216ENST00000638794 FUT3P21217 361 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 PSMB8P28062 276 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 CAPGP40121 348 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 ST3GAL4Q11206 333 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 MMDQ15546 238 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 LRRC36Q1X8D7 754 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 MORN2Q502X0 79 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 TTC23Q5W5X9 447 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 CDH26Q8IXH8 852 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 SETD9Q8NE22 299 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 C4orf3Q8WVX3 66 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 PRR25Q96S07 402 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 MBNL3Q9NUK0 354 aaKnown RBP13.17□□□□□ -0.3
SMN2-216ENST00000638794 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
SMN2-216ENST00000638794 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
SMN2-216ENST00000638794 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 TAS2R43P59537 309 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 FHL3Q13643 280 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 DOC2BQ14184 412 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 ODF3L1Q8IXM7 274 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
SMN2-216ENST00000638794 MYOZ3Q8TDC0 251 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 FAM46BQ96A09 425 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
SMN2-216ENST00000638794 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
SMN2-216ENST00000638794 PDCD6O75340 191 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 GLAP06280 429 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 OR5H8P0DN80 308 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 CELP19835 753 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 PPP1CCP36873 323 aaKnown RBP13.15□□□□□ -0.3
SMN2-216ENST00000638794 NKAIN3Q8N8D7 197 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 RITA1Q96K30 269 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 MRPL20Q9BYC9 149 aaKnown RBP13.15□□□□□ -0.3
SMN2-216ENST00000638794 KCNIP1Q9NZI2 227 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 SCOCQ9UIL1 159 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 JPT1Q9UK76 154 aa13.15□□□□□ -0.3
SMN2-216ENST00000638794 STAB2Q8WWQ8 2551 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 EFCAB10A6NFE3 127 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 G3V318 75 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 CNTFRP26992 372 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
SMN2-216ENST00000638794 ECI1P42126 302 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 ACTBP60709 375 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 C6orf141Q5SZD1 244 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 LAIR2Q6ISS4 152 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 ZNF554Q86TJ5 538 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 DHRSXQ8N5I4 330 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 UQCC2Q9BRT2 126 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 KLK15Q9H2R5 256 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 WSB1Q9Y6I7 421 aa13.14□□□□□ -0.31
SMN2-216ENST00000638794 MYL12BO14950 172 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 ATP6V0E1O15342 81 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 CD1AP06126 327 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 GNAO1P09471 354 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 NHLRC4P0CG21 123 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms