RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ZNF260Q3ZCT1 412 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 ZFP69Q49AA0 526 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 CDNFQ49AH0 187 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 OR10K2Q6IF99 312 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 STEAP1BQ6NZ63 245 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 ZNF782Q6ZMW2 699 aaPredicted RBP6.34□□□□□ -1.39
PNKP-229ENST00000637897 Q6ZTK2 550 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 LHFPL2Q6ZUX7 228 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 FAM185AQ8N0U4 392 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 CHST4Q8NCG5 386 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 OR4C16Q8NGL9 310 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 WIPF2Q8TF74 440 aaPredicted RBP6.34□□□□□ -1.39
PNKP-229ENST00000637897 TNFAIP8L1Q8WVP5 186 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 SLAMF9Q96A28 289 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 SPACA5Q96QH8 159 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 HIST1H2AAQ96QV6 131 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 PKIBQ9C010 78 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 LPAR5Q9H1C0 372 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 OR51J1Q9H342 316 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 GHITMQ9H3K2 345 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 BEX1Q9HBH7 125 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 GPN1Q9HCN4 374 aaPredicted RBP6.34□□□□□ -1.39
PNKP-229ENST00000637897 PCDHB16Q9NRJ7 776 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 SLC7A11Q9UPY5 501 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 A0A1B0GUS0 222 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 FAM230AA0A1W2PPH8 454 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 TMEM235A6NFC5 223 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ZNF736B4DX44 427 aaPredicted RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 H3BUX3 64 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ANGPTL7O43827 346 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ZNF780AO75290 641 aaPredicted RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 RAB3DO95716 219 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 CD74P04233 296 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 IL5P05113 134 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 FBP1P09467 338 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 HIST1H1DP16402 221 aaKnown RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 MGMTP16455 207 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 DUSP1P28562 367 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 RBP2P50120 134 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 RAB13P51153 203 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 FUT6P51993 359 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ATP1B3P54709 279 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 GNG2P59768 71 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 RPL15P61313 204 aaKnown RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 RPL31P62899 125 aaKnown RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 RPS27AP62979 156 aaKnown RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 CD83Q01151 205 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 DEFA6Q01524 100 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 LY6EQ16553 131 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 MOGAT2Q3SYC2 334 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 SLC22A6Q4U2R8 563 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 TRAPPC6BQ86SZ2 158 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ZNF573Q86YE8 665 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ZNF561Q8N587 486 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 FAM89BQ8N5H3 189 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 TPRX1Q8N7U7 411 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ZBTB8BQ8NAP8 495 aaPredicted RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 OR4S1Q8NGB4 309 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 GIMAP1Q8WWP7 306 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 RAB3CQ96E17 227 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 BORCS8Q96FH0 119 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 CYYR1Q96J86 154 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 SSX3Q99909 188 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 SLC25A21Q9BQT8 299 aaPredicted RBP6.33□□□□□ -1.4
PNKP-229ENST00000637897 TM2D1Q9BX74 207 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 SELENOIQ9C0D9 397 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 METTL9Q9H1A3 318 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 IFT46Q9NQC8 304 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.33□□□□□ -1.4
PNKP-229ENST00000637897 ZNF581Q9P0T4 197 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 OR14J1Q9UGF5 321 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 SCP2D1Q9UJQ7 156 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 ING4Q9UNL4 249 aa6.33□□□□□ -1.4
PNKP-229ENST00000637897 MEIS3P1A6NDR6 274 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 SERPINE3A8MV23 424 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 SNRPGP15A8MWD9 76 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 DISC1C4P0D8 188 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
PNKP-229ENST00000637897 CA11O75493 328 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 NXPH2O95156 264 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 CSTBP04080 98 aaKnown RBP6.32□□□□□ -1.4
PNKP-229ENST00000637897 CD3DP04234 171 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 TMEM225BP0DP42 221 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 GNB3P16520 340 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 BCL3P20749 454 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 COX7A1P24310 79 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 OR3A1P47881 315 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 ZP1P60852 638 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 CBX3Q13185 183 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 HABP2Q14520 560 aaPredicted RBP6.32□□□□□ -1.4
PNKP-229ENST00000637897 RSU1Q15404 277 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 MIDNQ504T8 468 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 ACTBL2Q562R1 376 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 RNASE10Q5GAN6 216 aaKnown RBP6.32□□□□□ -1.4
PNKP-229ENST00000637897 NCR3LG1Q68D85 454 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 BRICD5Q6PL45 260 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 ASCL4Q6XD76 172 aa6.32□□□□□ -1.4
PNKP-229ENST00000637897 SLC25A26Q70HW3 274 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms