RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 hADV38S2A0JD32 116 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 SNRPGP15A8MWD9 76 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 CTSDP07339 412 aaPredicted RBP17.41■□□□□ 0.38
CLN8-213ENST00000637156 MEF2CQ06413 473 aaPredicted RBP17.41■□□□□ 0.38
CLN8-213ENST00000637156 DHRS2Q13268 280 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 GNMTQ14749 295 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 FAHD2BQ6P2I3 314 aaPredicted RBP17.41■□□□□ 0.38
CLN8-213ENST00000637156 ZFAND1Q8TCF1 268 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 FAHD2AQ96GK7 314 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 RSRP1Q9BUV0 290 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 ZNF69Q9UC07 566 aa17.41■□□□□ 0.38
CLN8-213ENST00000637156 IGHV3-43A0A0B4J1X8 118 aa17.4■□□□□ 0.38
CLN8-213ENST00000637156 IGHV3-43DP0DP04 118 aa17.4■□□□□ 0.38
CLN8-213ENST00000637156 GPR6P46095 362 aaPredicted RBP17.4■□□□□ 0.38
CLN8-213ENST00000637156 LOXL3P58215 753 aa17.4■□□□□ 0.38
CLN8-213ENST00000637156 RRAS2P62070 204 aaPredicted RBP17.4■□□□□ 0.38
CLN8-213ENST00000637156 ZNF273Q14593 569 aa17.4■□□□□ 0.38
CLN8-213ENST00000637156 H1FXQ92522 213 aaKnown RBP17.4■□□□□ 0.38
CLN8-213ENST00000637156 LINC00574Q9H8X3 128 aa17.4■□□□□ 0.38
CLN8-213ENST00000637156 GPN1Q9HCN4 374 aaPredicted RBP17.4■□□□□ 0.38
CLN8-213ENST00000637156 MIOXQ9UGB7 285 aa17.4■□□□□ 0.38
CLN8-213ENST00000637156 F2RL2O00254 374 aa17.39■□□□□ 0.38
CLN8-213ENST00000637156 RPS2P15880 293 aaKnown RBP17.39■□□□□ 0.38
CLN8-213ENST00000637156 ERVFRD-1P60508 538 aa17.39■□□□□ 0.38
CLN8-213ENST00000637156 SUPT4H1P63272 117 aaKnown RBP17.39■□□□□ 0.38
CLN8-213ENST00000637156 LTC4SQ16873 150 aa17.39■□□□□ 0.38
CLN8-213ENST00000637156 SLC38A6Q8IZM9 456 aa17.39■□□□□ 0.38
CLN8-213ENST00000637156 ZNF431Q8TF32 576 aaPredicted RBP17.39■□□□□ 0.38
CLN8-213ENST00000637156 SECTM1Q8WVN6 248 aa17.39■□□□□ 0.38
CLN8-213ENST00000637156 LINC00312Q9Y6C7 94 aa17.39■□□□□ 0.38
CLN8-213ENST00000637156 C9orf170A2RU37 121 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 CREBL2O60519 120 aaPredicted RBP17.39■□□□□ 0.37
CLN8-213ENST00000637156 PPP1CCP36873 323 aaKnown RBP17.39■□□□□ 0.37
CLN8-213ENST00000637156 PIGPP57054 158 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 KRTAP10-9P60411 292 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 UTF1Q5T230 341 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 ZNF818PQ6ZRF7 136 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 OR10V1Q8NGI7 309 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 CCL28Q9NRJ3 127 aa17.39■□□□□ 0.37
CLN8-213ENST00000637156 C14orf166Q9Y224 244 aaKnown RBP17.39■□□□□ 0.37
CLN8-213ENST00000637156 UBE2J1Q9Y385 318 aaPredicted RBP17.39■□□□□ 0.37
CLN8-213ENST00000637156 NBPF19A0A087WUL8 3843 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 MMP23AO75900 390 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 HLA-AP01891 365 aaKnown RBP17.38■□□□□ 0.37
CLN8-213ENST00000637156 UBE2MP61081 183 aaKnown RBP17.38■□□□□ 0.37
CLN8-213ENST00000637156 FCN2Q15485 313 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 LPCAT3Q6P1A2 487 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 SPICQ8N5J4 248 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 SLC5A7Q9GZV3 580 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 MED28Q9H204 178 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 NARFLQ9H6Q4 476 aa17.38■□□□□ 0.37
CLN8-213ENST00000637156 ZNF729A6NN14 1252 aaPredicted RBP17.37■□□□□ 0.37
CLN8-213ENST00000637156 SSNA1O43805 119 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 IGLV2-14P01704 120 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 OR8U9P0C7N5 309 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 TAS2R31P59538 309 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 MORN2Q502X0 79 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 PHLDA2Q53GA4 152 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 ZNF787Q6DD87 383 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 LYG2Q86SG7 212 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 OR8U1Q8NH10 309 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 NEIL1Q96FI4 390 aaPredicted RBP17.37■□□□□ 0.37
CLN8-213ENST00000637156 PATZ1Q9HBE1 687 aaKnown RBP17.37■□□□□ 0.37
CLN8-213ENST00000637156 SLC2A9Q9NRM0 540 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 TAS2R3Q9NYW6 316 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 MALRD1Q5VYJ5 2156 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 DOPEY2Q9Y3R5 2298 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 CCL3L1P16619 93 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 CXCL3P19876 107 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 VAMP1P23763 118 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 LUMP51884 338 aaPredicted RBP17.37■□□□□ 0.37
CLN8-213ENST00000637156 CD276Q5ZPR3 534 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 WDR25Q64LD2 544 aaPredicted RBP17.37■□□□□ 0.37
CLN8-213ENST00000637156 NLRC3Q7RTR2 1065 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 OR11H7Q8NGC8 314 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 OR8B3Q8NGG8 313 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 NINJ1Q92982 152 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 OR8B2Q96RD0 313 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 DSCAML1Q8TD84 2053 aa17.37■□□□□ 0.37
CLN8-213ENST00000637156 GPR37O15354 613 aa17.36■□□□□ 0.37
CLN8-213ENST00000637156 RTN4IP1Q8WWV3 396 aaPredicted RBP17.36■□□□□ 0.37
CLN8-213ENST00000637156 ZNF486Q96H40 463 aaPredicted RBP17.36■□□□□ 0.37
CLN8-213ENST00000637156 AGMATQ9BSE5 352 aa17.36■□□□□ 0.37
CLN8-213ENST00000637156 JPT1Q9UK76 154 aa17.36■□□□□ 0.37
CLN8-213ENST00000637156 PTPN13Q12923 2485 aa17.36■□□□□ 0.37
CLN8-213ENST00000637156 GCN1Q92616 2671 aaKnown RBP17.36■□□□□ 0.37
CLN8-213ENST00000637156 HSD17B6O14756 317 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 YPEL1O60688 119 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 SFT2D2O95562 160 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 ZNF134P52741 427 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 ATP5J2P56134 94 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 ABCA11PQ4W5N1 156 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 FAM185AQ8N0U4 392 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 YPEL2Q96QA6 119 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 GPHA2Q96T91 129 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 BPESC1Q9GZL8 116 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 GNG12Q9UBI6 72 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 RNF150Q9ULK6 438 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 CRYM-AS1A6NIL9 109 aa17.35■□□□□ 0.37
CLN8-213ENST00000637156 IGHV3-7P01780 117 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms