RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	ERVH48-1	M5A8F1	160 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IFNA21	P01568	189 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CD55	P08174	381 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ADH4	P08319	380 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IGHV3-43D	P0DP04	118 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IL2RG	P31785	369 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LGI3	Q8N145	548 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	BVES	Q8NE79	360 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	PCNP	Q8WW12	178 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DCUN1D4	Q92564	292 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ARL11	Q969Q4	196 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	VRK1	Q99986	396 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SEBOX	Q9HB31	216 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	KCNJ16	Q9NPI9	418 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RNF150	Q9ULK6	438 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	HIVEP3	Q5T1R4	2406 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	HCFC1	P51610	2035 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	GYPA	P02724	150 aa		13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	STUM	Q69YW2	141 aa		13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CMTM1	Q8IZ96	169 aa		13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SELENOH	Q8IZQ5	122 aa	Known RBP	13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LURAP1	Q96LR2	239 aa		13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CCL13	Q99616	98 aa		13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DNTTIP1	Q9H147	329 aa		13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RBM7	Q9Y580	266 aa	Known RBP	13.22	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ODAM	A1E959	279 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	VSTM5	A8MXK1	200 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	C15orf65	H3BRN8	121 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	MGST3	O14880	152 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	PPP1CC	P36873	323 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	S100A10	P60903	97 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LTC4S	Q16873	150 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ACOT7L	Q6ZUV0	252 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FGFRL1	Q8N441	504 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	KCNRG	Q8N5I3	272 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR52M1	Q8NGK5	317 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR51H1	Q8NH63	302 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR1S1	Q8NH92	325 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ERGIC1	Q969X5	290 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DIRC2	Q96SL1	478 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	KCNS2	Q9ULS6	477 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DSCAML1	Q8TD84	2053 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TUBAL3	A6NHL2	446 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DEFB108A	A8MXU0	73 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SNAPC5	O75971	98 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TNFRSF1A	P19438	455 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	C4BPB	P20851	252 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	APOBEC3A	P31941	199 aa	Predicted RBP	13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	UQCRFS1	P47985	274 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	EDDM3B	P56851	147 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	PAX5	Q02548	391 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TFF3	Q07654	80 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	C6orf183	Q5T699	404 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	PRSS54	Q6PEW0	395 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TMEM56	Q96MV1	263 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	GAFA1	Q96PS6	74 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CISD1	Q9NZ45	108 aa	Known RBP	13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TMEM56-RWDD3	S4R434	201 aa		13.21	□□□□□ -0.29
CACNA1A-231	ENST00000636816		A0A0D9SG52	128 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TMEM8B	A6NDV4	472 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	MSGN1	A6NI15	193 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CDS2	O95674	445 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SCGB1D2	O95969	90 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LYL1	P12980	280 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	IRF2	P14316	349 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	F2R	P25116	425 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF695	Q8IW36	515 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR8H3	Q8N146	312 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SDSL	Q96GA7	329 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CNTNAP3B	Q96NU0	1288 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CNTNAP3	Q9BZ76	1288 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SAP30L	Q9HAJ7	183 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR2S2	Q9NQN1	319 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	RNF115	Q9Y4L5	304 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	RP2	O75695	350 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR2F2	O95006	317 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	UCP1	P25874	307 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR2F1	Q13607	317 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	DRAM1	Q8N682	238 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	FAM216B	Q8N7L0	139 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	C5orf30	Q96GV9	206 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	DYNLRB1	Q9NP97	96 aa		13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LSM5	Q9Y4Y9	91 aa	Known RBP	13.2	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ABCA4	P78363	2273 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	MBP	P02686	304 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LOX	P28300	417 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	P2RX3	P56373	397 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF345	Q14585	488 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TEX36	Q5VZQ5	186 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF788	Q6ZQV5	615 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF561	Q8N587	486 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	PPP1R35	Q8TAP8	253 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CCL17	Q92583	94 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TANC2	Q9HCD6	1990 aa		13.19	□□□□□ -0.3
CACNA1A-231	ENST00000636816		H0Y980	276 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SPDEF	O95238	335 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	IFNA7	P01567	189 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	GNLY	P22749	145 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms