RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ACTBL2Q562R1 376 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 LRRC10Q5BKY1 277 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 PLAC9Q5JTB6 97 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 ZNF660Q6AZW8 331 aaPredicted RBP12□□□□□ -0.49
LINC00339-208ENST00000634934 PDZD9Q8IXQ8 264 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 OR4S1Q8NGB4 309 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 OR52B4Q8NGK2 314 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 PPP1R35Q8TAP8 253 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 CYYR1Q96J86 154 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 FAAP24Q9BTP7 215 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 SHARPINQ9H0F6 387 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 ARL6Q9H0F7 186 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 ZMAT3Q9HA38 289 aaKnown RBP12□□□□□ -0.49
LINC00339-208ENST00000634934 RCC2Q9P258 522 aaKnown RBP12□□□□□ -0.49
LINC00339-208ENST00000634934 SLC25A10Q9UBX3 287 aaPredicted RBP12□□□□□ -0.49
LINC00339-208ENST00000634934 A0A0B4J2A0 478 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 FOXI3A8MTJ6 420 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-208ENST00000634934 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 K7N7A8 449 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 ARPC5O15511 151 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 IGHV2-5P01817 119 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 TK1P04183 234 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 GSTP1P09211 210 aaKnown RBP11.99□□□□□ -0.49
LINC00339-208ENST00000634934 GNB3P16520 340 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 ZBTB25P24278 435 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 OR3A1P47881 315 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 TAS2R31P59538 309 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 RBM39Q14498 530 aaKnown RBP11.99□□□□□ -0.49
LINC00339-208ENST00000634934 EDDM3AQ14507 147 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 ATXN7L3Q14CW9 347 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-208ENST00000634934 C2orf68Q2NKX9 166 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 CDNFQ49AH0 187 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 SPNS3Q6ZMD2 512 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 STPG2Q8N412 459 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 FGFRL1Q8N441 504 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 LHFPL5Q8TAF8 219 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 MITD1Q8WV92 249 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 ST8SIA4Q92187 359 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 RAB39BQ96DA2 213 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 SULT4A1Q9BR01 284 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 PECRQ9BY49 303 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 MFFQ9GZY8 342 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC00339-208ENST00000634934 SHPKQ9UHJ6 478 aa11.99□□□□□ -0.49
LINC00339-208ENST00000634934 TRAV14DV4A0A0A6YYC5 116 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 F5H0A9 414 aaPredicted RBP11.98□□□□□ -0.49
LINC00339-208ENST00000634934 AMY2AP04746 511 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 HEXAP06865 529 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 HIST1H1DP16402 221 aaKnown RBP11.98□□□□□ -0.49
LINC00339-208ENST00000634934 NUP62P37198 522 aaPredicted RBP11.98□□□□□ -0.49
LINC00339-208ENST00000634934 LMO4P61968 165 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 DHRS2Q13268 280 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 PNLIPRP3Q17RR3 467 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 DCAF12L2Q5VW00 463 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 LIN54Q6MZP7 749 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 LYG2Q86SG7 212 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 BVESQ8NE79 360 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 OR5D13Q8NGL4 314 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 DYRK2Q92630 601 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 CLN8Q9UBY8 286 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 HSF4Q9ULV5 492 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 TNFSF18Q9UNG2 199 aa11.98□□□□□ -0.49
LINC00339-208ENST00000634934 TRBV6-7A0A0A0MS04 114 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 RNF222A6NCQ9 220 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 MGST3O14880 152 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 PHF1O43189 567 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-208ENST00000634934 CA11O75493 328 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 GLAP06280 429 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 IL2RGP31785 369 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 EDDM3BP56851 147 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 GNB2P62879 340 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 AESQ08117 197 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 RNASE10Q5GAN6 216 aaKnown RBP11.97□□□□□ -0.49
LINC00339-208ENST00000634934 VAX1Q5SQQ9 334 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 WDR25Q64LD2 544 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-208ENST00000634934 ZNF841Q6ZN19 808 aa11.97□□□□□ -0.49
LINC00339-208ENST00000634934 H1FXQ92522 213 aaKnown RBP11.97□□□□□ -0.49
LINC00339-208ENST00000634934 FXYD6-FXYD2A0A087WZ82 144 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 TMEM235A6NFC5 223 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 OR5H14A6NHG9 310 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 MFNGO00587 321 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 FCN3O75636 299 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 CBX5P45973 191 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 ARL6IP1Q15041 203 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 KRBOX4Q5JUW0 171 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 C11orf87Q6NUJ2 197 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 C11orf88Q6PI97 169 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-208ENST00000634934 ARRDC1Q8N5I2 433 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 TPRX1Q8N7U7 411 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 OR1S1Q8NH92 325 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 PLPPR1Q8TBJ4 325 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 SSBP3Q9BWW4 388 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-208ENST00000634934 TINAGL1Q9GZM7 467 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-208ENST00000634934 FXYD6Q9H0Q3 95 aa11.96□□□□□ -0.49
LINC00339-208ENST00000634934 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms