RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 FMODQ06828 376 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 TMEM144Q7Z5S9 345 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 LYPD6Q86Y78 171 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 UEVLDQ8IX04 471 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 BOLLQ8N9W6 283 aaKnown RBP9.9□□□□□ -0.83
LINC00538-201ENST00000626109 OR1J2Q8NGS2 313 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 OR52E5Q8NH55 327 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 MRAPQ8TCY5 172 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 C11orf40Q8WZ69 217 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 PHYHIPLQ96FC7 376 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 CXorf58Q96LI9 332 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 SLC6A7Q99884 636 aa9.9□□□□□ -0.83
LINC00538-201ENST00000626109 MPDZO75970 2070 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF814B7Z6K7 855 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 E9PLN8 166 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 IGHG1P01857 330 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 FGF2P09038 288 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 KLK2P20151 261 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 S100A7P31151 101 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 IL13RA1P78552 427 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 SPIN3Q5JUX0 258 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 NSUN5P2Q63ZY6 315 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 OR2W3Q7Z3T1 314 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 HAPLN4Q86UW8 402 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 DOLPP1Q86YN1 238 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 KCNRGQ8N5I3 272 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 THAP6Q8TBB0 222 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 WNT2BQ93097 391 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 C10orf35Q96D05 121 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 R3HDM4Q96D70 268 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 SCGB3A2Q96PL1 93 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 VKORC1Q9BQB6 163 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 MED29Q9NX70 200 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 POLR1DQ9Y2S0 133 aa9.89□□□□□ -0.83
LINC00538-201ENST00000626109 DNAJC13O75165 2243 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 LOC105371242A0A075B767 164 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 TRGV8A0A0C4DH27 118 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF878C9JN71 531 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 PRSS46E5RG02 174 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 C1QL1O75973 258 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 TTRP02766 147 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF93P35789 620 aaPredicted RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 CYCSP99999 105 aaKnown RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 AKIRIN2Q53H80 203 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 NKAPLQ5M9Q1 402 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 LY6G6FQ5SQ64 297 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 AWAT2Q6E213 333 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OR10K2Q6IF99 312 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ACOT7LQ6ZUV0 252 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 INO80EQ8NBZ0 244 aaPredicted RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OR10R2Q8NGX6 335 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ABHD3Q8WU67 409 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 LINC00052Q96N35 136 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OXGR1Q96P68 337 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 SHARPINQ9H0F6 387 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 KLHL13Q9P2N7 655 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 TRAV14DV4A0A0A6YYC5 116 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 RAMP1O60894 148 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 FCN3O75636 299 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 CSN2P05814 226 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF43P17038 809 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ZBTB25P24278 435 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 MRPS11P82912 194 aaKnown RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 TLE4Q04727 773 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 NKPD1Q17RQ9 610 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ANGPTL5Q86XS5 388 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF101Q8IZC7 436 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OR4S1Q8NGB4 309 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OR52N4Q8NGI2 321 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 STOML3Q8TAV4 291 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 TSNAXQ99598 290 aaKnown RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 NKX3-1Q99801 234 aaPredicted RBP9.88□□□□□ -0.83
LINC00538-201ENST00000626109 TNFSF18Q9UNG2 199 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 FAM215AQ9Y5M1 114 aa9.88□□□□□ -0.83
LINC00538-201ENST00000626109 LOC102725191A0A1B0GVB3 256 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 C9orf170A2RU37 121 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 M0R036 132 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 BCL2L11O43521 198 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 VSIG8P0DPA2 414 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 GUCA1AP43080 201 aaPredicted RBP9.87□□□□□ -0.83
LINC00538-201ENST00000626109 CA7P43166 264 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 RANP62826 216 aaKnown RBP9.87□□□□□ -0.83
LINC00538-201ENST00000626109 QRFPP83859 136 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 RTL6Q6ICC9 239 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 ZNF529Q6P280 563 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 PAQR4Q8N4S7 273 aaPredicted RBP9.87□□□□□ -0.83
LINC00538-201ENST00000626109 Q96M66 194 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 SEC61A2Q9H9S3 476 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 RNF122Q9H9V4 155 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 B3GAT1Q9P2W7 334 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 VSIG4Q9Y279 399 aa9.87□□□□□ -0.83
LINC00538-201ENST00000626109 BOD1L1Q8NFC6 3051 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms