RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SCGB1D1O95968 90 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 G6PCP35575 357 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 PTGDSP41222 190 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 DLK1P80370 383 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 GLRX5Q86SX6 157 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 IL36RNQ9UBH0 155 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 WFDC8Q8IUA0 241 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 OR10D4PQ8NGN7 298 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 PRDM14Q9GZV8 571 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 OR51I2Q9H344 312 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 DLL3Q9NYJ7 618 aa11.04□□□□□ -0.64
MSH6-215ENST00000622629 CEBPDP49716 269 aaPredicted RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 FGFBP3Q8TAT2 258 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 TREM2Q9NZC2 230 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 KIF26AQ9ULI4 1882 aaPredicted RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 LOC102723996A0A087X1L8 192 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 SPAARA0A1B0GVQ0 90 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 PGLYRP1O75594 196 aaPredicted RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 OPN1MWP04001 364 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 OPN1MW2P0DN77 364 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 OPN1MW3P0DN78 364 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 CCL1P22362 96 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 SUPT4H1P63272 117 aaKnown RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 OR10G4Q8NGN3 311 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 OR10G9Q8NGN4 311 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 OR10G7Q8NGN6 311 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 TMEM37Q8WXS4 190 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 FAM210BQ96KR6 192 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 RARRES2Q99969 163 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 Q9N2K0 584 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 DECR2Q9NUI1 292 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 CASP6P55212 293 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 CPEB3Q8NE35 698 aaKnown RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 REG4Q9BYZ8 158 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 RNF122Q9H9V4 155 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 A0A1B0GU03 582 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 GNG10P50151 68 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 TIPARPQ7Z3E1 657 aaKnown RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 LYG1Q8N1E2 194 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 EIF4E3Q8N5X7 224 aaKnown RBP11.03□□□□□ -0.64
MSH6-215ENST00000622629 TMEM68Q96MH6 324 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 FOXJ2Q9P0K8 574 aa11.03□□□□□ -0.64
MSH6-215ENST00000622629 MUC6Q6W4X9 2439 aa11.02□□□□□ -0.64
MSH6-215ENST00000622629 BATFQ16520 125 aa11.02□□□□□ -0.64
MSH6-215ENST00000622629 DEPPQ9NTK1 212 aa11.02□□□□□ -0.64
MSH6-215ENST00000622629 OR1A1Q9P1Q5 309 aa11.02□□□□□ -0.64
MSH6-215ENST00000622629 ZNF106Q9H2Y7 1883 aaKnown RBP11.02□□□□□ -0.65
MSH6-215ENST00000622629 ABCA1O95477 2261 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 OR7C2O60412 319 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 OR2H2O95918 312 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 FABP4P15090 132 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
MSH6-215ENST00000622629 GPR146Q96CH1 333 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 HEATR1Q9H583 2144 aaKnown RBP11.02□□□□□ -0.65
MSH6-215ENST00000622629 CLN8Q9UBY8 286 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 AP4M1O00189 453 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 RRP8O43159 456 aaKnown RBP11.02□□□□□ -0.65
MSH6-215ENST00000622629 PITX3O75364 302 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 TMEM241Q24JQ0 296 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 NSUN5P2Q63ZY6 315 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 WNK2Q9Y3S1 2297 aa11.02□□□□□ -0.65
MSH6-215ENST00000622629 G3V3Q6 166 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 DANCRP0C864 163 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 CTSSP25774 331 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 H3F3AP84243 136 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 DTD1Q8TEA8 209 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 GALNT14Q96FL9 552 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 CXXC4Q9H2H0 198 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 ZNF665Q9H7R5 613 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 PNRC2Q9NPJ4 139 aaKnown RBP11.01□□□□□ -0.65
MSH6-215ENST00000622629 KCNIP2Q9NS61 270 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 LRRC30A6NM36 301 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 H0YL77 283 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 ST8SIA5O15466 376 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 SRSF10O75494 262 aaKnown RBP11.01□□□□□ -0.65
MSH6-215ENST00000622629 CHRNA7P36544 502 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 QRFPP83859 136 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 WDFY1Q8IWB7 410 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 MARS2Q96GW9 593 aaKnown RBP11.01□□□□□ -0.65
MSH6-215ENST00000622629 IGKV1-12A0A0C4DH73 117 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 ZNF320A2RRD8 509 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 H0Y980 276 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 IGKV1D-12P01611 117 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 MDKP21741 143 aaPredicted RBP11.01□□□□□ -0.65
MSH6-215ENST00000622629 RPS23P62266 143 aaKnown RBP11.01□□□□□ -0.65
MSH6-215ENST00000622629 OR52L2PQ8NGH6 319 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 ZNF581Q9P0T4 197 aa11.01□□□□□ -0.65
MSH6-215ENST00000622629 NKX6-3A6NJ46 265 aa11□□□□□ -0.65
MSH6-215ENST00000622629 NKX2-8O15522 239 aa11□□□□□ -0.65
MSH6-215ENST00000622629 RHBDL1O75783 438 aa11□□□□□ -0.65
MSH6-215ENST00000622629 FABP1P07148 127 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms