RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 TMEM231Q9H6L2 316 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 OR1A1Q9P1Q5 309 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 MEMO1Q9Y316 297 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 FAM90A27PA6NNH2 459 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 HMSDA8MTL9 139 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 S100A8P05109 93 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 C1QTNF9P0C862 333 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 RPS2P15880 293 aaKnown RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 CD40P25942 277 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 CCKARP32238 428 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 SPCS3P61009 180 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 CYCSP99999 105 aaKnown RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 GAPTQ8N292 157 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 POC1AQ8NBT0 407 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 ASB13Q8WXK3 278 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 ERRFI1Q9UJM3 462 aaPredicted RBP8.39□□□□□ -1.07
VTA1-205ENST00000620996 SSUH2Q9Y2M2 353 aa8.39□□□□□ -1.07
VTA1-205ENST00000620996 ATRXP46100 2492 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 SHANK1Q9Y566 2161 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 IGKV1D-13A0A0B4J2D9 117 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 IGKV1-6A0A0C4DH72 117 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 PTBP3O95758 552 aaKnown RBP8.38□□□□□ -1.07
VTA1-205ENST00000620996 CD8AP01732 235 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 IGKV1-13P0DP09 117 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 PMELP40967 661 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 RAB5BP61020 215 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 MZT1Q08AG7 82 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 RAB32Q13637 225 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 SMIM21Q3B7S5 101 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ADAM5Q6NVV9 412 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 TMEM108Q6UXF1 575 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 SPAG16Q8N0X2 631 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ZNF383Q8NA42 475 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 PIK3IP1Q96FE7 263 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 MISP3Q96FF7 219 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 MRPL37Q9BZE1 423 aaKnown RBP8.38□□□□□ -1.07
VTA1-205ENST00000620996 KCNIP1Q9NZI2 227 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ROS1P08922 2347 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 BTBD17A6NE02 478 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 F5H0A9 414 aaPredicted RBP8.38□□□□□ -1.07
VTA1-205ENST00000620996 PSPNO60542 156 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 MED6O75586 246 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 MUC1P15941 1255 aaPredicted RBP8.38□□□□□ -1.07
VTA1-205ENST00000620996 GNRHRP30968 328 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 GLRXP35754 106 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 TAS2R60P59551 318 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ERVK11-1P61568 191 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 RPS23P62266 143 aaKnown RBP8.38□□□□□ -1.07
VTA1-205ENST00000620996 GGNBP1Q5YKI7 109 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ACP7Q6ZNF0 438 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ZNF818PQ6ZRF7 136 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 LYZL2Q7Z4W2 148 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 TBC1D26Q86UD7 250 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 C11orf53Q8IXP5 236 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 KDF1Q8NAX2 398 aaPredicted RBP8.38□□□□□ -1.07
VTA1-205ENST00000620996 DEFB108BQ8NET1 73 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 OR51H1Q8NH63 302 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 ITLN1Q8WWA0 313 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 METRNQ9UJH8 293 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 BSNQ9UPA5 3926 aa8.38□□□□□ -1.07
VTA1-205ENST00000620996 TUBG1P23258 451 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 MDH2P40926 338 aaKnown RBP8.37□□□□□ -1.07
VTA1-205ENST00000620996 COL10A1Q03692 680 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 COTL1Q14019 142 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 SPRNQ5BIV9 151 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 TMEM268Q5VZI3 342 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 MRGPRDQ8TDS7 321 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 C2orf50Q96LR7 162 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 TAF9BQ9HBM6 251 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 TUBG2Q9NRH3 451 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 NXPH3O95157 252 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 CTXN2P0C2S0 81 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 RPA2P15927 270 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 IL2RGP31785 369 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 LUMP51884 338 aaPredicted RBP8.37□□□□□ -1.07
VTA1-205ENST00000620996 FAM201AQ5SY85 155 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 ZNF695Q8IW36 515 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 CMTM1Q8IZ96 169 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 TMEM171Q8WVE6 324 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 PLPPR2Q96GM1 343 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 BOD1Q96IK1 185 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 NMES1Q9C002 83 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 OR5AC2Q9NZP5 309 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 PPP1R3CQ9UQK1 317 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 ZZEF1O43149 2961 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 C3orf85A0A1B0GTC6 90 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 TMEM30CPA0ZSE6 113 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 MPPED1O15442 326 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 EGR1P18146 543 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 S100GP29377 79 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 OR3A1P47881 315 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 BSPH1Q075Z2 132 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 ZNF146Q15072 292 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 FAM169BQ8N8A8 192 aa8.37□□□□□ -1.07
VTA1-205ENST00000620996 OR4A4PQ8NGN8 299 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms