RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PQLC2Q6ZP29 291 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 SH2D5Q6ZV89 423 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 A0A0B4J2E0 115 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1B0GX12 115 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 H0Y8X5 98 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 MGPP08493 103 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 POLR2GP62487 172 aaKnown RBP eCLIP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 FMODQ06828 376 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 SP6Q3SY56 376 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 LRRC75AQ8NAA5 344 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 CLEC5AQ9NY25 188 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 SHROOM3Q8TF72 1996 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TNFSF14O43557 240 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 GZMHP20718 246 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 PRDX2P32119 198 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 SELENOPP49908 381 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 ISXQ2M1V0 245 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 C5orf30Q96GV9 206 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TUBGCP6Q96RT7 1819 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1B0GWB2 263 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 OR11H12B2RN74 326 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 LINC01559Q495D7 138 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 LYG1Q8N1E2 194 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TTC9CQ8N5M4 171 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 OR11H1Q8NG94 326 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 OR11H2Q8NH07 326 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 MRPL18Q9H0U6 180 aaKnown RBP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 PLEKHB1Q9UF11 243 aaPredicted RBP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 SIGLEC7Q9Y286 467 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 PKD1L3Q7Z443 1732 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TCRBV16S1A1N1A0A5B0 115 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF729A6NN14 1252 aaPredicted RBP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 FAM90A26D6RGX4 464 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM250H0YL14 139 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 WDR38Q5JTN6 314 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 RBKSQ9H477 322 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 A0A096LPE4 126 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1W2PPZ6 126 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 PRSS8Q16651 343 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 THSD4Q6ZMP0 1018 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF841Q6ZN19 808 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 OR10D3Q8NH80 312 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TSPAN32Q96QS1 320 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TIMP4Q99727 224 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 PAXXQ9BUH6 204 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 DERL1Q9BUN8 251 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 RAB1BQ9H0U4 201 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 NTMQ9P121 344 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 PTP4A3O75365 173 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 ATP5LO75964 103 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 HTN1P15515 57 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 KLF9Q13886 244 aaPredicted RBP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 RTP5Q14D33 572 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 OR1L8Q8NGR8 309 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 LINC00615Q96LM1 132 aaPredicted RBP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 CXXC4Q9H2H0 198 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
COLCA1-205ENST00000620864 V9GYH0 126 aa6.31□□□□□ -1.4
COLCA1-205ENST00000620864 EIF3GO75821 320 aaKnown RBP eCLIP6.3□□□□□ -1.4
COLCA1-205ENST00000620864 ZFPL1O95159 310 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 OR4A8P0C604 315 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF519Q8TB69 540 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 DYNLRB2Q8TF09 96 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 GLRX2Q9NS18 164 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 WSB2Q9NYS7 404 aaPredicted RBP6.3□□□□□ -1.4
COLCA1-205ENST00000620864 OGG1O15527 345 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 SPRY3O43610 288 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 ICOSLGO75144 302 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 S1PR2O95136 353 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 PRF1P14222 555 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 PSG9Q00887 426 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 HMGCLL1Q8TB92 370 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 SLC25A40Q8TBP6 338 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 C8orf44Q96CB5 159 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF764Q96H86 408 aaPredicted RBP6.3□□□□□ -1.4
COLCA1-205ENST00000620864 DIRC2Q96SL1 478 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 FOXB1Q99853 325 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TRAV17A0A0B4J275 112 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TRGC2P03986 189 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF250P15622 560 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 GLIPR1P48060 266 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM179BQ7Z7N9 219 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 ASB5Q8WWX0 329 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 SPACA5Q96QH8 159 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TAF1P21675 1872 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 SPRY1O43609 319 aaPredicted RBP6.3□□□□□ -1.4
COLCA1-205ENST00000620864 C10orf128Q5T292 105 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 NRSN2Q9GZP1 204 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TIAM2Q8IVF5 1701 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 GCM2O75603 506 aaPredicted RBP6.3□□□□□ -1.4
COLCA1-205ENST00000620864 LDLRAD3Q86YD5 345 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 MMP25Q9NPA2 562 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 VSIG4Q9Y279 399 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 PPIL1Q9Y3C6 166 aa6.3□□□□□ -1.4
COLCA1-205ENST00000620864 LINC00869P0C866 280 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms