RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NPVFQ9HCQ7 196 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 PLA2G3Q9NZ20 509 aa9.29□□□□□ -0.92
CLTCL1-209ENST00000617103 A0A0B4J293 547 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 CA2P00918 260 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 IGKV1D-16P01601 117 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 CXorf66Q5JRM2 361 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 DOLPP1Q86YN1 238 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 OR1L1Q8NH94 360 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 C5orf66Q9H5L9 145 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 FZR1Q9UM11 496 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 WIPI2Q9Y4P8 454 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 TRAV39A0A0B4J263 110 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 A8MWL6 223 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 M0QZ24 198 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 HIST1H1BP16401 226 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 TAF15Q92804 592 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 FLYWCH2Q96CP2 140 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 PCOLCE2Q9UKZ9 415 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 UFC1Q9Y3C8 167 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 SPTBP11277 2137 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 K7ESF4 209 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 AGAP20933 346 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 ACP1P24666 158 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 ZNF83P51522 516 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 ZNF137PP52743 207 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 ZNF729A6NN14 1252 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 PLP1P60201 277 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 GNB2P62879 340 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 SLC35B1P78383 322 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 ZNF600Q6ZNG1 722 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 SSX8Q7RTT4 187 aa9.28□□□□□ -0.92
CLTCL1-209ENST00000617103 SHISA3A0PJX4 238 aa9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 TNFSF15O95150 251 aa9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 ITGBL1O95965 494 aaPredicted RBP9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 PRRX1P54821 245 aa9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 KLF3P57682 345 aaPredicted RBP9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 RPS11P62280 158 aaKnown RBP eCLIP9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 RPL30P62888 115 aaKnown RBP9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 TNFAIP6P98066 277 aaPredicted RBP9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 GUSBP11Q6P575 273 aa9.27□□□□□ -0.92
CLTCL1-209ENST00000617103 SCN3AQ9NY46 2000 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 M0R296 226 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 DNPH1O43598 174 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 SYNGR1O43759 233 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 LYZL6O75951 148 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 SOD3P08294 240 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 TNXAQ16473 311 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 GABRG3Q99928 467 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 MRPL18Q9H0U6 180 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 PXMP4Q9Y6I8 212 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 KIF13BQ9NQT8 1826 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 TRAV17A0A0B4J275 112 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 FABP2P12104 132 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 SPINK2P20155 84 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 COL9A1P20849 921 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 ICE1Q9Y2F5 2266 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 ZNF716A6NP11 495 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 PRF1P14222 555 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 CD40P25942 277 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 PEBP1P30086 187 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 HYAL1Q12794 435 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 PRSS53Q2L4Q9 553 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 POC1AQ8NBT0 407 aa9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 NUDT16L1Q9BRJ7 211 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-209ENST00000617103 DNASE2O00115 360 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 EML2O95834 649 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 MEOX1P50221 254 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 IBA57Q5T440 356 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 ATRAIDQ6UW56 229 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 UCN2Q96RP3 112 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM140Q9NV12 185 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 NMUP48645 174 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 TAS2R60P59551 318 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 AESQ08117 197 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 GAB4Q2WGN9 574 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM27BQ5VT28 67 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 SLC25A34Q6PIV7 304 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 C9orf40Q8IXQ3 194 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 MYOZ3Q8TDC0 251 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 PLA2G2FQ9BZM2 168 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 PIPOXQ9P0Z9 390 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 TINAGQ9UJW2 476 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 IGLV1-36A0A0B4J1U3 117 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 LINC00587B1AMM8 73 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 MS4A18H0YCH9 400 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 J3QR06 171 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 LINC01565O15544 149 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 FOXS1O43638 330 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 ORM1P02763 201 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 COMPP49747 757 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 FHITP49789 147 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms