RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 PJVKQ0ZLH3 352 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 FOXC1Q12948 553 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 FAM209AQ5JX71 171 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 PXDC1Q5TGL8 231 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 TRAT1Q6PIZ9 186 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 SPACA3Q8IXA5 215 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 DRAM1Q8N682 238 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 OR1L1Q8NH94 360 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 PRRG2O14669 202 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 FBXO24O75426 580 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 MED6O75586 246 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 OR8U9P0C7N5 309 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 IL2RGP31785 369 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 VAMP2P63027 116 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 CLEC9AQ6UXN8 241 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 MRGPRGQ86SM5 289 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 OR8U1Q8NH10 309 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 TMEM171Q8WVE6 324 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 GPR146Q96CH1 333 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 PARP12Q9H0J9 701 aaKnown RBP13.19□□□□□ -0.3
NR1H3-235ENST00000616973 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
NR1H3-235ENST00000616973 KCNS2Q9ULS6 477 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 IGSF23A1L1A6 192 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 IGKV1-39P01597 117 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 HBZP02008 142 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 IGKV1D-39P04432 117 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 SPP1P10451 314 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 LPAR6P43657 344 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 KRBOX4Q5JUW0 171 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 DOLPP1Q86YN1 238 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 ZNF645Q8N7E2 425 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 LYPD6BQ8NI32 183 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 UBALD1Q8TB05 177 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 RNF115Q9Y4L5 304 aa13.18□□□□□ -0.3
NR1H3-235ENST00000616973 A0A0G2JRQ6 117 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 TMEM218A2RU14 115 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 SSSCA1O60232 199 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 EGR1P18146 543 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 PRDX2P32119 198 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 GABRA2P47869 451 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 HOXA4Q00056 320 aaPredicted RBP13.17□□□□□ -0.3
NR1H3-235ENST00000616973 BAXQ07812 192 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 ZNF585BQ52M93 769 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 BOLLQ8N9W6 283 aaKnown RBP13.17□□□□□ -0.3
NR1H3-235ENST00000616973 Q8NA96 180 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 MEGF10Q96KG7 1140 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
NR1H3-235ENST00000616973 KIAA1324LA8MWY0 1029 aaPredicted RBP13.17□□□□□ -0.3
NR1H3-235ENST00000616973 ZNF737O75373 536 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 CAV2P51636 162 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 FAM27E3Q08E93 113 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 EIF4EBP1Q13541 118 aaPredicted RBP13.17□□□□□ -0.3
NR1H3-235ENST00000616973 ZNF266Q14584 549 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 TBR1Q16650 682 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 OR2V2Q96R30 315 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 MAGT1Q9H0U3 335 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 ZNF835Q9Y2P0 537 aa13.17□□□□□ -0.3
NR1H3-235ENST00000616973 K7ENP7 123 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 WRBO00258 174 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 LHBP01229 141 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 APOC3P02656 99 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 DANCRP0C864 163 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 BMP5P22003 454 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 GATA4P43694 442 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 GLIPR1P48060 266 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 RAB5CP51148 216 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 F2RL1P55085 397 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 GCSAMQ8N6F7 178 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 PPP1R35Q8TAP8 253 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 NINJ1Q92982 152 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 SNX22Q96L94 193 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 RAB40CQ96S21 281 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 SCNM1Q9BWG6 230 aa13.16□□□□□ -0.3
NR1H3-235ENST00000616973 IGKV1D-17A0A075B6S4 117 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 ATP6V1G2-DDX39BF2Z307 99 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 CHST1O43916 411 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 TFF1P04155 84 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 CD40P25942 277 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 PAX9P55771 341 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 HTD2P86397 168 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 SWI5Q1ZZU3 235 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 C10orf91Q5T1B1 145 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 ALKBH2Q6NS38 261 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 ODF3L1Q8IXM7 274 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
NR1H3-235ENST00000616973 OR52L2PQ8NGH6 319 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 OR13A1Q8NGR1 328 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 FAM216AQ8WUB2 273 aa13.15□□□□□ -0.3
NR1H3-235ENST00000616973 HRH4Q9H3N8 390 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms