RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 ZNF100Q8IYN0 542 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 SLC35G3Q8N808 338 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 CSNK2A3Q8NEV1 391 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 RNASEH2CQ8TDP1 164 aaKnown RBP9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 SPSB1Q96BD6 273 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 TM2D1Q9BX74 207 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 EHFQ9NZC4 300 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 GPR132Q9UNW8 380 aa9.77□□□□□ -0.85
PCDHGA9-202ENST00000616887 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 SEC11BP0C7V7 166 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 GLIPR1P48060 266 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 SOX8P57073 446 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 DAZAP2Q15038 168 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 IAH1Q2TAA2 248 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 TEX38Q6PEX7 206 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 FBXL14Q8N1E6 418 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR5H2Q8NGV7 314 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 C10orf35Q96D05 121 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 IL36RNQ9UBH0 155 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 MEMO1Q9Y316 297 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 SCGB1D2O95969 90 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 HERPUD1Q15011 391 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 CNN3Q15417 329 aaKnown RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 SPATA46Q5T0L3 261 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 BTNL3Q6UXE8 466 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 TMEM182Q6ZP80 229 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 Q6ZPA2 131 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 EMG1Q92979 244 aaKnown RBP9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 WFDC1Q9HC57 220 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 AK3Q9UIJ7 227 aa9.76□□□□□ -0.85
PCDHGA9-202ENST00000616887 RBFOX3A6NFN3 312 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 GLRA1P23415 457 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR3A1P47881 315 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 ERVFC1-1P60608 527 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 PAX5Q02548 391 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 COLCA1Q6ZS62 124 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 DIRC2Q96SL1 478 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 PRDM14Q9GZV8 571 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 LIME1Q9H400 295 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 MED12LQ86YW9 2145 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF816-ZNF321PA0A0X1KG74 233 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 SLC22A20A6NK97 555 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 TGOLN2O43493 480 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 CA11O75493 328 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 CELA3BP08861 270 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 FUT3P21217 361 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 VAX1Q5SQQ9 334 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 SLC25A26Q70HW3 274 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 C1orf87Q8N0U7 546 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF611Q8N823 705 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 TVP23CQ96ET8 276 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 RTBDNQ9BSG5 229 aaPredicted RBP9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZDHHC11Q9H8X9 412 aa9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 TNRC6AQ8NDV7 1962 aaKnown RBP9.75□□□□□ -0.85
PCDHGA9-202ENST00000616887 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 TCF21O43680 179 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 DEDDO75618 318 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 GCGP01275 180 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 LMO1P25800 156 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 WNT5AP41221 380 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR3A2P47893 321 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 GPM6AP51674 278 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 RND3P61587 244 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 CLEC2AQ6UVW9 174 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 LHFPL2Q6ZUX7 228 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 SPSB4Q96A44 273 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 SYT3Q9BQG1 590 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 SCNM1Q9BWG6 230 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 ST3GAL6Q9Y274 331 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 RFNGQ9Y644 331 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 SERPINE3A8MV23 424 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 KNG1P01042 644 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 TBPP20226 339 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 ZNF705AQ6ZN79 300 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 LRP11Q86VZ4 500 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 TMEM178AQ8NBL3 297 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 NEK7Q8TDX7 302 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 POM121L2Q96KW2 1035 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 NIPSNAP3BQ9BS92 247 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 ARV1Q9H2C2 271 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 HSF4Q9ULV5 492 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 OSGIN2Q9Y236 505 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 ARHGAP21Q5T5U3 1957 aa9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 RP1L1Q8IWN7 2480 aaPredicted RBP9.74□□□□□ -0.85
PCDHGA9-202ENST00000616887 IGHV3-64DA0A0J9YX35 117 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 HSPB6O14558 160 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 XRCC2O43543 280 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 TK1P04183 234 aa9.73□□□□□ -0.85
PCDHGA9-202ENST00000616887 PRDX4Q13162 271 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms