RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 A0A1W2PPE2 198 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 A0A1W2PR64 198 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 A0A1W2PRV1 198 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 TMPRSS2O15393 492 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 NDUFB3O43676 98 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 HBZP02008 142 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 MBP02144 154 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 TLE1Q04724 770 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 C1orf185Q5T7R7 199 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR1L1Q8NH94 360 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 WIPI2Q9Y4P8 454 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 A8MXE2 369 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 F12P00748 615 aaPredicted RBP11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 UCP3P55916 312 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 QRFPP83859 136 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 S100PBPQ96BU1 408 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 ATP5SQ99766 215 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM90A27PA6NNH2 459 aa11.27□□□□□ -0.6
PPP4R3B-206ENST00000616407 SLC25A6P12236 298 aa11.27□□□□□ -0.6
PPP4R3B-206ENST00000616407 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.6
PPP4R3B-206ENST00000616407 RNF7Q9UBF6 113 aa11.27□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGKV1-27A0A075B6S5 117 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 H0Y980 276 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 C16orf97H3BN30 126 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 GAPDHP04406 335 aaKnown RBP11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 IGHV1-2P23083 117 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 SULT1A1P50225 295 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 FLI1Q01543 452 aaPredicted RBP11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 HIST2H3AQ71DI3 136 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 BIVMQ86UB2 503 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 UHRF2Q96PU4 802 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 OR2V2Q96R30 315 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 RUNX1Q01196 453 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 R3HDM4Q96D70 268 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
PPP4R3B-206ENST00000616407 PCNX1Q96RV3 2341 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 WNT9BO14905 357 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 SCAF4O95104 1147 aaKnown RBP11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 SULT1A2P50226 295 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 CCL8P80075 99 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 HEXA-AS1Q9H8Q6 139 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 SPRR3Q9UBC9 169 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 SMPD2O60906 423 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 OPN1MWP04001 364 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 OPN1MW2P0DN77 364 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 OPN1MW3P0DN78 364 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 NAT1P18440 290 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 OTX1P32242 354 aaPredicted RBP11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 PSG7Q13046 419 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 PFDN5Q99471 154 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 RAB7AP51149 207 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 MRPS11P82912 194 aaKnown RBP11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 FFAR4Q5NUL3 377 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 A0A1W2PPE3 182 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 KIAA0141Q14154 515 aaPredicted RBP11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 DHRS11Q6UWP2 260 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 DTD1Q8TEA8 209 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 POM121Q96HA1 1249 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 MAP1LC3BQ9GZQ8 125 aa11.26□□□□□ -0.61
PPP4R3B-206ENST00000616407 RBFOX3A6NFN3 312 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 AQP7O14520 342 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 HRASP01112 189 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 CECR9P0C854 216 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 MUC1P15941 1255 aaPredicted RBP11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 NDUFA6P56556 154 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 UBE2G2P60604 165 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 FAM209AQ5JX71 171 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 GPR146Q96CH1 333 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 A0A1W2PPH5 198 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 H7BYZ3 331 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 ADH4P08319 380 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 MPZP25189 248 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 HGFACQ04756 655 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 HES1Q14469 280 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 NSUN5P2Q63ZY6 315 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 ZBTB34Q8NCN2 500 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 RND1Q92730 232 aa11.25□□□□□ -0.61
PPP4R3B-206ENST00000616407 GALNT14Q96FL9 552 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms