RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 H3BP45 60 aa11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 EWSR1Q01844 656 aaKnown RBP eCLIP11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 ALKBH6Q3KRA9 238 aa11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM58AQ8N1B3 248 aa11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM213BQ8TBF2 198 aa11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 PARP11Q9NR21 331 aa11.83□□□□□ -0.52
CACNA1C-231ENST00000616390 TRAV24A0A0B4J272 114 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 CCL11P51671 97 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 VAMP2P63027 116 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 CXorf67Q86X51 503 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 OR2C3Q8N628 320 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 OR4D5Q8NGN0 318 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 OR1K1Q8NGR3 316 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 C2CD4CQ8TF44 421 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 OR2J1Q9GZK6 312 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 CARHSP1Q9Y2V2 147 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 DEGS1O15121 323 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 GRPP07492 148 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 P2RY1P47900 373 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 GNG3P63215 75 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 IL13RA2Q14627 380 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 FBXW9Q5XUX1 488 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 LHFPL4Q7Z7J7 247 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 ZFP62Q8NB50 900 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 MDS2Q8NDY4 140 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 ABHD14AQ9BUJ0 271 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 OR1A1Q9P1Q5 309 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 FBXO7Q9Y3I1 522 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 ATP23Q9Y6H3 246 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 CEBPGP53567 150 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 MRPS11P82912 194 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 TNFRSF9Q07011 255 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 ZNF573Q86YE8 665 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 CMTM1Q8IZ96 169 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 MRPL30Q8TCC3 161 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 WDYHV1Q96HA8 205 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 TOLLIPQ9H0E2 274 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 OR14J1Q9UGF5 321 aa11.82□□□□□ -0.52
CACNA1C-231ENST00000616390 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 CDRT15L2A8MXV6 281 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 KIR2DS4P43632 304 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 KIR2DS1Q14954 304 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 MPV17LQ2QL34 196 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 CNEP1R1Q8N9A8 125 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 BOD1Q96IK1 185 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 DLL3Q9NYJ7 618 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 PPP1R3CQ9UQK1 317 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 INTS1Q8N201 2190 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 CDIPTO14735 213 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 NKX2-8O15522 239 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 DAOP14920 347 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 TUBG1P23258 451 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 CDKN1BP46527 198 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 CEBPDP49716 269 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 DVL1P1P54792 670 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 C10orf91Q5T1B1 145 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 FAM185AQ8N0U4 392 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 OR10A7Q8NGE5 316 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 OR5C1Q8NGR4 320 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 RPS10P5Q9NQ39 176 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 SIRT7Q9NRC8 400 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
CACNA1C-231ENST00000616390 PROB1E7EW31 1015 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 M0R036 132 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 PGLYRP1O75594 196 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 AGFG2O95081 481 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 IFNA10P01566 189 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 CD5P06127 495 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 PPP1CCP36873 323 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 MRPL49Q13405 166 aaKnown RBP11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 GUK1Q16774 197 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 NUDT10Q8NFP7 164 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 BCL2L2Q92843 193 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 KCNS2Q9ULS6 477 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 FZR1Q9UM11 496 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 CADP27708 2225 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 CHST1O43916 411 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 DANCRP0C864 163 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 OR13C7P0DN81 318 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 SPP1P10451 314 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 PSG2P11465 335 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 SNCAP37840 140 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 RUNX1Q01196 453 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 SPNS3Q6ZMD2 512 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 OR2G3Q8NGZ4 309 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 TRIB1Q96RU8 372 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 TMEM9BQ9NQ34 198 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 CACFD1Q9UGQ2 172 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 TRAPPC2LQ9UL33 140 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
CACNA1C-231ENST00000616390 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms