RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC38A11Q08AI6 406 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 COTL1Q14019 142 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 EXT1Q16394 746 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 FFAR4Q5NUL3 377 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 CYP2G1PQ6ZSU1 146 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 ADPRHL1Q8NDY3 354 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 OR8G5Q8NG78 346 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 OR10G4Q8NGN3 311 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 OR10G9Q8NGN4 311 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 OR10G7Q8NGN6 311 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 RNASEH2CQ8TDP1 164 aaKnown RBP5.73□□□□□ -1.49
LMO3-235ENST00000616247 SPSB1Q96BD6 273 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 CIB3Q96Q77 187 aaPredicted RBP5.73□□□□□ -1.49
LMO3-235ENST00000616247 DEFB126Q9BYW3 111 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 OR2J1Q9GZK6 312 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 TMEM9BQ9NQ34 198 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 GPR27Q9NS67 375 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 RNF150Q9ULK6 438 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 TRIOO75962 3097 aa5.73□□□□□ -1.49
LMO3-235ENST00000616247 MDFIC2A0A1B0GVS7 189 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 DUXBA0A1W2PPF3 345 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 SLC22A20A6NK97 555 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 M0QZK8 103 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 GGCTO75223 188 aaKnown RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 KRASP01116 189 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 NTF3P20783 257 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 KITLGP21583 273 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 CBLN1P23435 193 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 IL3RAP26951 378 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 CHRNB4P30926 498 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 TNFRSF4P43489 277 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 RAB7AP51149 207 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ID3Q02535 119 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ZNF90Q03938 601 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ZFP36L1Q07352 338 aaKnown RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 MMDQ15546 238 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 DNLZQ5SXM8 178 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 Q6ZVH6 145 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ATOH7Q8N100 152 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 GBGT1Q8N5D6 347 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 MRGPRX4Q96LA9 322 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ZNF488Q96MN9 340 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 LPAR2Q9HBW0 351 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 LAMA1P25391 3075 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ABCA7Q8IZY2 2146 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 AHCTF1Q8WYP5 2266 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 FOXI3A8MTJ6 420 aaPredicted RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 C11orf94C9JXX5 98 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 LINC01565O15544 149 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 NDUFB4O95168 129 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ZNF32P17041 273 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 GABRG2P18507 467 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 SLC35B1P78383 322 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 TMEM183BQ1AE95 376 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ALKBH2Q6NS38 261 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 R3HDM4Q96D70 268 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 RAB40CQ96S21 281 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 TMEM242Q9NWH2 141 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 A0A1W2PPV4 95 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 KIAA1324LA8MWY0 1029 aaPredicted RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 PGLYRP1O75594 196 aaPredicted RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 C1QTNF9P0C862 333 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 CRISP2P16562 243 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 GPM6AP51674 278 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 PAX9P55771 341 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 TPPP2P59282 170 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 PLPPR5Q32ZL2 321 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 KIAA1644Q3SXP7 199 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 DCAF10Q5QP82 559 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 COL5A1-AS1Q5SY13 56 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 Q6ZN92 141 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 Q6ZRM9 215 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 RTL10Q7L3V2 364 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 CARFQ8N187 725 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ZNF808Q8N4W9 903 aaPredicted RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 RPP25LQ8N5L8 163 aaKnown RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 PLPPR1Q8TBJ4 325 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 ZCCHC14Q8WYQ9 949 aaKnown RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 PSMF1Q92530 271 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 NEIL1Q96FI4 390 aaPredicted RBP5.72□□□□□ -1.49
LMO3-235ENST00000616247 SIGLEC12Q96PQ1 595 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 PPP1R14DQ9NXH3 145 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 TAAR3PQ9P1P4 343 aa5.72□□□□□ -1.49
LMO3-235ENST00000616247 IGKV3D-11A0A0A0MRZ8 115 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 A0A0U1RQV5 110 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 BCL3P20749 454 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 CCL1P22362 96 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 F2RP25116 425 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 CD38P28907 300 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 HINT1P49773 126 aaPredicted RBP5.71□□□□□ -1.49
LMO3-235ENST00000616247 EDDM3BP56851 147 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 RBM11P57052 281 aaKnown RBP5.71□□□□□ -1.49
LMO3-235ENST00000616247 CRIP3Q6Q6R5 217 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 SIGLECL1Q8N7X8 197 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 POC1BQ8TC44 478 aa5.71□□□□□ -1.49
LMO3-235ENST00000616247 TAF15Q92804 592 aaKnown RBP eCLIP5.71□□□□□ -1.49
LMO3-235ENST00000616247 A0A1B0GX78 115 aa5.71□□□□□ -1.5
LMO3-235ENST00000616247 TRAPPC2LH3BP13 241 aa5.71□□□□□ -1.5
LMO3-235ENST00000616247 LILRA1O75019 489 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms