RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 FNDC9Q8TBE3 224 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 TP53RKQ96S44 253 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 NICN1Q9BSH3 213 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 PRDM14Q9GZV8 571 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 MOB1AQ9H8S9 216 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 GSKIPQ9P0R6 139 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 MRPS28Q9Y2Q9 187 aaKnown RBP11.23□□□□□ -0.61
FOXN3-219ENST00000615335 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 LOC102725191A0A1B0GVB3 256 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 CEACAM18A8MTB9 384 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 DEDDO75618 318 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 FUT3P21217 361 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-219ENST00000615335 PPP1CCP36873 323 aaKnown RBP11.23□□□□□ -0.61
FOXN3-219ENST00000615335 KRTCAP3Q53RY4 240 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 RTN4RL2Q86UN3 420 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 ABHD3Q8WU67 409 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 SNRNP40Q96DI7 357 aaKnown RBP11.23□□□□□ -0.61
FOXN3-219ENST00000615335 SPACA5Q96QH8 159 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 LPAR5Q9H1C0 372 aa11.23□□□□□ -0.61
FOXN3-219ENST00000615335 AURKAIP1Q9NWT8 199 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-219ENST00000615335 K7N7A8 449 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 MPIG6BO95866 241 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 IGHG1P01857 330 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 OR3A2P47893 321 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 VAMP2P63027 116 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 TAF9Q16594 264 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 ABHD12BQ7Z5M8 362 aaPredicted RBP11.22□□□□□ -0.61
FOXN3-219ENST00000615335 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 TECTBQ96PL2 329 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
FOXN3-219ENST00000615335 ELOVL1Q9BW60 279 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 SF3B5Q9BWJ5 86 aaKnown RBP11.22□□□□□ -0.61
FOXN3-219ENST00000615335 GPR132Q9UNW8 380 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 PHF3Q92576 2039 aaKnown RBP11.22□□□□□ -0.61
FOXN3-219ENST00000615335 CACNA1BQ00975 2339 aa11.22□□□□□ -0.61
FOXN3-219ENST00000615335 TRAF3IP2O43734 574 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-219ENST00000615335 TNFSF13O75888 250 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 FHITP49789 147 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 CLDN17P56750 224 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 RND3P61587 244 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 PRDX4Q13162 271 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF324BQ6AW86 544 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-219ENST00000615335 FBXW12Q6X9E4 464 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 OR5AS1Q8N127 324 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 FAM213BQ8TBF2 198 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 CABLES2Q9BTV7 478 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 A0A0A6YYD4 124 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 FIGNL2A6NMB9 653 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 TMEM238C9JI98 176 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 TMEM225BP0DP42 221 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 CDAP32320 146 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 BMI1P35226 326 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 ALDH3B1P43353 468 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 ZNF121P58317 390 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-219ENST00000615335 HIST1H3AP68431 136 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-219ENST00000615335 CARD17Q5XLA6 110 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 OR8B12Q8NGG6 310 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 KCNG3Q8TAE7 436 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
FOXN3-219ENST00000615335 ZGRF1Q86YA3 2104 aa11.21□□□□□ -0.62
FOXN3-219ENST00000615335 TRAV39A0A0B4J263 110 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 SLC22A20A6NK97 555 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 ZNF716A6NP11 495 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 CCL25O15444 150 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 SOCS1O15524 211 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
FOXN3-219ENST00000615335 OR3A4PP47883 348 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 SGPP2Q8IWX5 399 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM230Q96A57 120 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 FAM71F1Q96KD3 344 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-219ENST00000615335 TRIB1Q96RU8 372 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 PARD6GQ9BYG4 376 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-219ENST00000615335 BANF2Q9H503 90 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 GPR84Q9NQS5 396 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 A0A1B0GU03 582 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 FPR2P25090 351 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 CEBPGP53567 150 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 UBE2V1Q13404 147 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 ACOT6Q3I5F7 207 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-219ENST00000615335 ANKRD55Q3KP44 614 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 VAX1Q5SQQ9 334 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 GPR157Q5UAW9 335 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 MCEMP1Q8IX19 187 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM59Q9BXS4 323 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 C5orf66Q9H5L9 145 aa11.2□□□□□ -0.62
FOXN3-219ENST00000615335 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms