RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 GNMTQ14749 295 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 ZNF146Q15072 292 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 SPRNQ5BIV9 151 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 WDR82Q6UXN9 313 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 GFRALQ6UXV0 394 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 ZNF695Q8IW36 515 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 Q8IYB0 196 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 LILRB1Q8NHL6 650 aaPredicted RBP16.11■□□□□ 0.17
MMP28-204ENST00000615136 UBALD1Q8TB05 177 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 CABLES2Q9BTV7 478 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 DUSP13Q9UII6 198 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 RAXQ9Y2V3 346 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 A6NLC8 198 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 PRRG2O14669 202 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 SNAPINO95295 136 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 HLA-DRB3P79483 266 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 SWI5Q1ZZU3 235 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 NMSQ5H8A3 153 aa16.11■□□□□ 0.17
MMP28-204ENST00000615136 RNASEK-C17orf49H0YIS7 233 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 PSPNO60542 156 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 H2AFB1P0C5Y9 115 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 DANCRP0C864 163 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 NKX2-1P43699 371 aaPredicted RBP16.1■□□□□ 0.17
MMP28-204ENST00000615136 VHLLQ6RSH7 139 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 IL22RA2Q969J5 263 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 CCL28Q9NRJ3 127 aa16.1■□□□□ 0.17
MMP28-204ENST00000615136 PCNX1Q96RV3 2341 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.09■□□□□ 0.17
MMP28-204ENST00000615136 FAM157AC9JC47 383 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 ATP6V1G2-DDX39BF2Z307 99 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 H0Y980 276 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 CTRB1P17538 263 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 TUBG1P23258 451 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 EWSR1Q01844 656 aaKnown RBP eCLIP16.09■□□□□ 0.17
MMP28-204ENST00000615136 NHLH2Q02577 135 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 CTRB2Q6GPI1 263 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 DHRS7BQ6IAN0 325 aaPredicted RBP16.09■□□□□ 0.17
MMP28-204ENST00000615136 FAM122CQ6P4D5 195 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 OR5D13Q8NGL4 314 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 MUCL1Q96DR8 90 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 KIRREL1Q96J84 757 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 TUBG2Q9NRH3 451 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 ADGRG4Q8IZF6 3080 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 C1QTNF9BB2RNN3 333 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 NPIPB11E5RHQ5 1161 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 HAND1O96004 215 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 OR8U9P0C7N5 309 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 ID4P47928 161 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 DVL1P1P54792 670 aaPredicted RBP16.09■□□□□ 0.17
MMP28-204ENST00000615136 NKX6-1P78426 367 aaPredicted RBP16.09■□□□□ 0.17
MMP28-204ENST00000615136 ZNF497Q6ZNH5 498 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 CMTM1Q8IZ96 169 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 OR2C3Q8N628 320 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 OR2Z1Q8NG97 314 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 OR8U1Q8NH10 309 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 OR1A1Q9P1Q5 309 aa16.09■□□□□ 0.17
MMP28-204ENST00000615136 A0A1B0GWJ7 208 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 HSD17B6O14756 317 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 ADAM20O43506 726 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 PTBP3O95758 552 aaKnown RBP16.08■□□□□ 0.16
MMP28-204ENST00000615136 SFTA3P0C7M3 94 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 VDAC1P21796 283 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 H1FOOQ8IZA3 346 aaPredicted RBP16.08■□□□□ 0.16
MMP28-204ENST00000615136 TREM2Q9NZC2 230 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 METRNQ9UJH8 293 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 OR2W1Q9Y3N9 320 aa16.08■□□□□ 0.16
MMP28-204ENST00000615136 SH2D1BO14796 132 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 CRYAAP02489 173 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 ACAA1P09110 424 aaPredicted RBP16.07■□□□□ 0.16
MMP28-204ENST00000615136 WNT2P09544 360 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 PVALBP20472 110 aaPredicted RBP16.07■□□□□ 0.16
MMP28-204ENST00000615136 MDH2P40926 338 aaKnown RBP16.07■□□□□ 0.16
MMP28-204ENST00000615136 NPBWR1P48145 328 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 RAB5CP51148 216 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 KIAA2026Q5HYC2 2103 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 ACP7Q6ZNF0 438 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 PRR18Q8N4B5 295 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 COMMD1Q8N668 190 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 IL1F10Q8WWZ1 152 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 ZNF835Q9Y2P0 537 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 PGLYRP1O75594 196 aaPredicted RBP16.07■□□□□ 0.16
MMP28-204ENST00000615136 F12P00748 615 aaPredicted RBP16.07■□□□□ 0.16
MMP28-204ENST00000615136 POLR2GP62487 172 aaKnown RBP eCLIP16.07■□□□□ 0.16
MMP28-204ENST00000615136 MOB1BQ7L9L4 216 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 OR10J5Q8NHC4 309 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 TMEM171Q8WVE6 324 aa16.07■□□□□ 0.16
MMP28-204ENST00000615136 LYRM2Q9NU23 88 aaPredicted RBP16.07■□□□□ 0.16
MMP28-204ENST00000615136 ICE1Q9Y2F5 2266 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 IGSF23A1L1A6 192 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 AGPAT2O15120 278 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 PITX3O75364 302 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 LMO1P25800 156 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 CD80P33681 288 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 SHEQ5VZ18 495 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 TMEM88Q6PEY1 159 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 CACFD1Q9UGQ2 172 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 NDRG3Q9UGV2 375 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 STRAPQ9Y3F4 350 aaKnown RBP16.06■□□□□ 0.16
MMP28-204ENST00000615136 C9JQL5 133 aa16.06■□□□□ 0.16
MMP28-204ENST00000615136 MMP9P14780 707 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms