RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 TUBG1P23258 451 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 CD82P27701 267 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 NOVA1P51513 510 aaKnown RBP14.09□□□□□ -0.15
CNOT3-208ENST00000613073 SOX8P57073 446 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 CD81P60033 236 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 ICAM4Q14773 271 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 PHLDA2Q53GA4 152 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 FBXW12Q6X9E4 464 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 FBXL14Q8N1E6 418 aa14.09□□□□□ -0.15
CNOT3-208ENST00000613073 FUT6P51993 359 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 PIGPP57054 158 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 WDR25Q64LD2 544 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-208ENST00000613073 COLCA1Q6ZS62 124 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 NOL4LQ96MY1 436 aaPredicted RBP14.08□□□□□ -0.16
CNOT3-208ENST00000613073 A0A087WWC5 75 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 NPSP0C0P6 89 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 OPRM1P35372 400 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 TAS2R46P59540 309 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 RAB11AP62491 216 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 RUNX1Q01196 453 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 GCNT2Q8N0V5 402 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 SPTBN2O15020 2390 aa14.08□□□□□ -0.16
CNOT3-208ENST00000613073 MSTNO14793 375 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 RPL23AP62750 156 aaKnown RBP14.07□□□□□ -0.16
CNOT3-208ENST00000613073 DNLZQ5SXM8 178 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 NECAP1Q8NC96 275 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 OR13D1Q8NGV5 346 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 SPSB4Q96A44 273 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 ZDHHC11Q9H8X9 412 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 GAB2Q9UQC2 676 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 ST3GAL6Q9Y274 331 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 SHANK1Q9Y566 2161 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 MARCH11A6NNE9 402 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 NPBWR2P48146 333 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 CLN3Q13286 438 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 SLC25A26Q70HW3 274 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 MRPL21Q7Z2W9 205 aaKnown RBP14.07□□□□□ -0.16
CNOT3-208ENST00000613073 THNSL2Q86YJ6 484 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 OSR2Q8N2R0 312 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 OR5L1Q8NGL2 311 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 PITPNC1Q9UKF7 332 aa14.07□□□□□ -0.16
CNOT3-208ENST00000613073 TNRC6AQ8NDV7 1962 aaKnown RBP14.07□□□□□ -0.16
CNOT3-208ENST00000613073 A0A1W2PR80 420 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 TMEM217Q8N7C4 229 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 ZNF611Q8N823 705 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 OR4X1Q8NH49 305 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 REPIN1Q9BWE0 567 aaKnown RBP14.06□□□□□ -0.16
CNOT3-208ENST00000613073 CEP250Q9BV73 2442 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 NXPH3O95157 252 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 CEACAM6P40199 344 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 EWSR1Q01844 656 aaKnown RBP eCLIP14.06□□□□□ -0.16
CNOT3-208ENST00000613073 TLE1Q04724 770 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 PLP2Q04941 152 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 TMEM183AQ8IXX5 376 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 CABLES2Q9BTV7 478 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 CBY1Q9Y3M2 126 aa14.06□□□□□ -0.16
CNOT3-208ENST00000613073 DVL1O14640 695 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 CD55P08174 381 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 GPM6AP51674 278 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 TCF15Q12870 199 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 MALLQ13021 153 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 PRDX4Q13162 271 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 P2RY6Q15077 328 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 DEFB109BQ30KR1 87 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 FAM180AQ6UWF9 173 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 MEX3BQ6ZN04 569 aaKnown RBP14.05□□□□□ -0.16
CNOT3-208ENST00000613073 SLC35G3Q8N808 338 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 POM121L2Q96KW2 1035 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 LIME1Q9H400 295 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 MUC6Q6W4X9 2439 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 CRYM-AS1A6NIL9 109 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 ARR3P36575 388 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 COL10A1Q03692 680 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 FBXW9Q5XUX1 488 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 APOBEC3DQ96AK3 386 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-208ENST00000613073 MAGT1Q9H0U3 335 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 KIAA1456Q9P272 454 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 GNG13Q9P2W3 67 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 GOLT1BQ9Y3E0 138 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 MAP1BP46821 2468 aaKnown RBP14.05□□□□□ -0.16
CNOT3-208ENST00000613073 PTPRZ1P23471 2315 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-208ENST00000613073 ZFP92A6NM28 416 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 ARL6IP1Q15041 203 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 NCR3LG1Q68D85 454 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 ASCL4Q6XD76 172 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 BEND2Q8NDZ0 799 aa14.05□□□□□ -0.16
CNOT3-208ENST00000613073 FGF23Q9GZV9 251 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-208ENST00000613073 XKRY2A2RUG3 117 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 CST7O76096 145 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 RPL29P47914 159 aaKnown RBP14.04□□□□□ -0.16
CNOT3-208ENST00000613073 ABCA11PQ4W5N1 156 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 SPATA46Q5T0L3 261 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 OR1K1Q8NGR3 316 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 GVINP1Q7Z2Y8 2422 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 ST8SIA3O43173 380 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 OR7C1O76099 320 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-208ENST00000613073 TEX38Q6PEX7 206 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 OR11L1Q8NGX0 322 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms