RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PRR32B1ATL7 298 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 TAAR5O14804 337 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 H3F3AP84243 136 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 FAM201AQ5SY85 155 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 C9orf106Q8NAJ2 232 aa9.37□□□□□ -0.91
FAM3A-221ENST00000612856 TRAV34A0A0B4J273 112 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 CST7O76096 145 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 ASAH2BP0C7U1 165 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 IGLV3-21P80748 117 aaPredicted RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 EGR3Q06889 387 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 RTL6Q6ICC9 239 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 GMPPAQ96IJ6 420 aaPredicted RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 RNF126Q9BV68 326 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 OR2H1Q9GZK4 316 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 ATG2AQ2TAZ0 1938 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 LOC390937A0A1W2PQ73 354 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 EREGO14944 169 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 TRAF3IP2O43734 574 aaPredicted RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BKO60814 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BJP06899 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 CST2P09228 141 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 TMEM11P17152 192 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BOP23527 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BBP33778 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 SULT1A2P50226 295 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BDP58876 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BCP62807 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 MZT1Q08AG7 82 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST2H2BEQ16778 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 RPRMLQ8N4K4 120 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BHQ93079 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BNQ99877 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 HIST1H2BMQ99879 126 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 POLDIP2Q9Y2S7 368 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 NKX6-3A6NJ46 265 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 PHF1O43189 567 aaPredicted RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 GPR137BO60478 399 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 BPNT1O95861 308 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 PNPP00491 289 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 APELAP0DMC3 54 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 GNG3P63215 75 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 NAAAQ02083 359 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 TNFRSF9Q07011 255 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 WDR25Q64LD2 544 aaPredicted RBP9.36□□□□□ -0.91
FAM3A-221ENST00000612856 POC1BQ8TC44 478 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 IL22RA2Q969J5 263 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 ADAM19Q9H013 955 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 PARP11Q9NR21 331 aa9.36□□□□□ -0.91
FAM3A-221ENST00000612856 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 CEBPZOSA8MTT3 80 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 PPP5D1E7EU14 171 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 K7EM74 188 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 FOXO1Q12778 655 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 TBR1Q16650 682 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 CYB561D1Q8N8Q1 229 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 ADPRHL1Q8NDY3 354 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 RNF128Q8TEB7 428 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 TVP23CQ96ET8 276 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 SLC2A8Q9NY64 477 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 SPINT2O43291 252 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 CNIH1O95406 144 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 FAM157CP0CG43 387 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 ERVK-16P61578 105 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 ZNF92Q03936 586 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 TEX30Q5JUR7 227 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 UNQ9370/PRO34162Q6UXP9 181 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 Q8WTZ3 238 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 ARHGAP5-AS1Q96IT6 56 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 ADAMTS9Q9P2N4 1935 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 IGLV3-12A0A075B6K2 115 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 SH2D1BO14796 132 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 SMAD7O15105 426 aaKnown RBP9.35□□□□□ -0.91
FAM3A-221ENST00000612856 CELA3BP08861 270 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 FOLR2P14207 255 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 CEBPDP49716 269 aaPredicted RBP9.35□□□□□ -0.91
FAM3A-221ENST00000612856 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 BOD1Q96IK1 185 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
FAM3A-221ENST00000612856 TNRC18O15417 2968 aaPredicted RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 CXCL1P09341 107 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 MST1LQ2TV78 715 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 KRTCAP3Q53RY4 240 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 ADAT3Q96EY9 351 aaPredicted RBP9.34□□□□□ -0.91
FAM3A-221ENST00000612856 CNTD2Q9H8S5 307 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 HSPB2A8KAH6 182 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 LYNX1G3V0Z9 82 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 H3BP45 60 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 IGHV2-5P01817 119 aa9.34□□□□□ -0.91
FAM3A-221ENST00000612856 LYNX1P0DP58 116 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms