RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 A0A1W2PPQ1 181 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 ZNF737O75373 536 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 IGHV3-13P01766 116 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 IGHV3-7P01780 117 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 CRYAAP02489 173 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 FABP1P07148 127 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 OTX1P32242 354 aaPredicted RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 UBE2G2P60604 165 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 ACOT6Q3I5F7 207 aaPredicted RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 FFAR4Q5NUL3 377 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 TIPARPQ7Z3E1 657 aaKnown RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 SAXO1Q8IYX7 474 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 OR5D13Q8NGL4 314 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 HIST1H2BAQ96A08 127 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 BSCL2Q96G97 398 aaPredicted RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 TAAR6Q96RI8 345 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 MTCH1Q9NZJ7 389 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 MUC22E2RYF6 1773 aaPredicted RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 M0R1X1 148 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
LIG4-204ENST00000611712 FAM157CP0CG43 387 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 RND3P61587 244 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 ABLIM2Q6H8Q1 611 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 MRPL41Q8IXM3 137 aaKnown RBP7.44□□□□□ -1.22
LIG4-204ENST00000611712 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 RNF122Q9H9V4 155 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 OR1A1Q9P1Q5 309 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 LRRC3CA6NJW4 275 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 A8MXE2 369 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 H0YL77 283 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 FCGR3BO75015 233 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 AGFG2O95081 481 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 OR2H2O95918 312 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 COX5BP10606 129 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 DEFB109BQ30KR1 87 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 SLC23A3Q6PIS1 610 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 GGNQ86UU5 652 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 OR10D4PQ8NGN7 298 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 OR13D1Q8NGV5 346 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 ZNF703Q9H7S9 590 aaPredicted RBP7.44□□□□□ -1.22
LIG4-204ENST00000611712 RIF1Q5UIP0 2472 aaKnown RBP7.44□□□□□ -1.22
LIG4-204ENST00000611712 PCNX3Q9H6A9 2034 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 MDFIC2A0A1B0GVS7 189 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 PINLYPA6NC86 204 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 CEACAM18A8MTB9 384 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 SLC25A6P12236 298 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 MMP9P14780 707 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 G6PCP35575 357 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 AESQ08117 197 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 HFEQ30201 348 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 ZADH2Q8N4Q0 377 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 TMEM45BQ96B21 275 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 MSI2Q96DH6 328 aaKnown RBP7.44□□□□□ -1.22
LIG4-204ENST00000611712 ABHD14BQ96IU4 210 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 S1PR3Q99500 378 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 LINC00470Q9BZP3 86 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 FOXJ2Q9P0K8 574 aa7.44□□□□□ -1.22
LIG4-204ENST00000611712 SHANK1Q9Y566 2161 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 DENND4AQ7Z401 1863 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 M0R1B8 84 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 NTN3O00634 580 aaPredicted RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 ACTL6BO94805 426 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 HGFACQ04756 655 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 KHDC3LQ587J8 217 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 OR10G4Q8NGN3 311 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 OR10G9Q8NGN4 311 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 OR10G7Q8NGN6 311 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 LRRC29Q8WV35 223 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 HPSE2Q8WWQ2 592 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 C18orf12Q96KH6 178 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 DDA1Q9BW61 102 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 OR51I2Q9H344 312 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 MSL2Q9HCI7 577 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 RYDENQ9NUL5 291 aaKnown RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 TRAV17A0A0B4J275 112 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 FBP1P09467 338 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 FOXG1P55316 489 aaPredicted RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 TMEM241Q24JQ0 296 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 TMEM41BQ5BJD5 291 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 TPRX1Q8N7U7 411 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 ZNF665Q9H7R5 613 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 BARX1Q9HBU1 254 aaPredicted RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 ROS1P08922 2347 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 OR5H1A6NKK0 313 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 ZNF705FA8MVS1 300 aaPredicted RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 TGOLN2O43493 480 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 RHBDL1O75783 438 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 EIF3GO75821 320 aaKnown RBP eCLIP7.43□□□□□ -1.22
LIG4-204ENST00000611712 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
LIG4-204ENST00000611712 SMIM6P0DI80 62 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 ADCYAP1P18509 176 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 BMP5P22003 454 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 HIST1H3AP68431 136 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms