RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 DNAL1Q4LDG9 190 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 PYHIN1Q6K0P9 492 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 ACBD7Q8N6N7 88 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 TCTEX1D1Q8N7M0 179 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 MINDY2Q8NBR6 621 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 RBMXL1Q96E39 390 aaKnown RBP13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 TMED9Q9BVK6 235 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 RNF150Q9ULK6 438 aa13.37□□□□□ -0.27
CHMP4A-211ENST00000609024 MCRIP1C9JLW8 97 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 SLC25A17O43808 307 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 IGHV3-11P01762 117 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 MT-ND4P03905 459 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 CD2P06729 351 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 FASP25445 335 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 PPP3R1P63098 170 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 C5orf64Q2M2E5 130 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 STEAP3Q658P3 488 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 HAPLN4Q86UW8 402 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 Q8N1Y9 231 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 CCDC197Q8NCU1 140 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 CASTOR1Q8WTX7 329 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 TRUB1Q8WWH5 349 aaKnown RBP13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 JAM3Q9BX67 310 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 GABARAPL1Q9H0R8 117 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 SPACA1Q9HBV2 294 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 OR2S2Q9NQN1 319 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 POMPQ9Y244 141 aa13.36□□□□□ -0.27
CHMP4A-211ENST00000609024 C12orf77C9JDV5 145 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 H0Y980 276 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF780AO75290 641 aaPredicted RBP13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 POLR2IP36954 125 aaKnown RBP13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 SOX2P48431 317 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF134P52741 427 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 TPPP2P59282 170 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 HAGHQ16775 308 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 SYT6Q5T7P8 510 aaPredicted RBP13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 TRAT1Q6PIZ9 186 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF497Q6ZNH5 498 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF439Q8NDP4 499 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ALG8Q9BVK2 526 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ETAA1Q9NY74 926 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 TAS2R4Q9NYW5 299 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 IL36GQ9NZH8 169 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 KCNIP1Q9NZI2 227 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF581Q9P0T4 197 aa13.35□□□□□ -0.27
CHMP4A-211ENST00000609024 IGLV1-51P01701 117 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 HBZP02008 142 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 GTF2F2P13984 249 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 CNTFRP26992 372 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF93P35789 620 aaPredicted RBP13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 VHLP40337 213 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 GYS2P54840 703 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 MEDAGQ5VYS4 303 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 ZNF660Q6AZW8 331 aaPredicted RBP13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 ASCL4Q6XD76 172 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 LHFPL3Q86UP9 236 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 OR51A2Q8NGJ7 313 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 OR4K15Q8NH41 348 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 PDCD1LG2Q9BQ51 273 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 GABARAPL3Q9BY60 117 aa13.34□□□□□ -0.27
CHMP4A-211ENST00000609024 GBX2P52951 348 aaPredicted RBP13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 ACTBL2Q562R1 376 aa13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 DDI2Q5TDH0 399 aa13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 OR1L1Q8NH94 360 aa13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 MRPS24Q96EL2 167 aaKnown RBP13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 MS4A10Q96PG2 267 aa13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 ABHD14AQ9BUJ0 271 aa13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 MRPL20Q9BYC9 149 aaKnown RBP13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 ORC6Q9Y5N6 252 aa13.33□□□□□ -0.28
CHMP4A-211ENST00000609024 ATP8B1O43520 1251 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 RGS11O94810 467 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 FCGR1AP12314 374 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 ZP3P21754 424 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 RAB40BQ12829 278 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 GPR176Q14439 515 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 LRRC36Q1X8D7 754 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 SLC22A6Q4U2R8 563 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 UNQ5815/PRO19632Q6UWF5 114 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 AMIGO2Q86SJ2 522 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 SYS1Q8N2H4 156 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 NPBQ8NG41 125 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 RITA1Q96K30 269 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 SLA2Q9H6Q3 261 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 TPSG1Q9NRR2 321 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 ZNF355PQ9NSJ1 428 aa13.32□□□□□ -0.28
CHMP4A-211ENST00000609024 J3QRE1 110 aa13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 SOX15O60248 233 aa13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 MORN2Q502X0 79 aa13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 PPP1R27Q86WC6 154 aa13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 GPR148Q8TDV2 347 aa13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 ISG20L2Q9H9L3 353 aaKnown RBP13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 RANGRFQ9HD47 186 aaPredicted RBP13.31□□□□□ -0.28
CHMP4A-211ENST00000609024 HYDINQ4G0P3 5121 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms