RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 BEST4Q8NFU0 473 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 OR4S1Q8NGB4 309 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 OR4D10Q8NGI6 311 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
LINC00539-204ENST00000608957 TNFRSF14Q92956 283 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 SEBOXQ9HB31 216 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-204ENST00000608957 CHMP1AQ9HD42 196 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-204ENST00000608957 SIRT7Q9NRC8 400 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 ETAA1Q9NY74 926 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 ONECUT1Q9UBC0 465 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 SLC25A10Q9UBX3 287 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-204ENST00000608957 ZNF230Q9UIE0 474 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-204ENST00000608957 KIAA2026Q5HYC2 2103 aa9.44□□□□□ -0.9
LINC00539-204ENST00000608957 A0A0U1RQK1 487 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 RNASEK-C17orf49H0YIS7 233 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 M0QYG6 137 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 NAPSAO96009 420 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 TAS2R46P59540 309 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 COL10A1Q03692 680 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 PLET1Q6UQ28 207 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 ZNF782Q6ZMW2 699 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-204ENST00000608957 PNKDQ8N490 385 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 KIR3DL3Q8N743 410 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 DUSP18Q8NEJ0 188 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 OR4K15Q8NH41 348 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 MAFIPQ8WZ33 124 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 SDSLQ96GA7 329 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 TINAGL1Q9GZM7 467 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-204ENST00000608957 MMP28Q9H239 520 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 RIMS4Q9H426 269 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-204ENST00000608957 ZNF286AQ9HBT8 521 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 TNFRSF19Q9NS68 423 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 COPZ2Q9P299 210 aa9.43□□□□□ -0.9
LINC00539-204ENST00000608957 DISC1C4P0D8 188 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 GPR37O15354 613 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 PSPNO60542 156 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 AMY2AP04746 511 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 NDUFB7P17568 137 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 PRDX2P32119 198 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 HRH1P35367 487 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 KCNJ3P48549 501 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 CCR6P51684 374 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 BPIFB3P59826 476 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 ARPC4P59998 168 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 ATXN7L3Q14CW9 347 aaPredicted RBP9.42□□□□□ -0.9
LINC00539-204ENST00000608957 SRSF7Q16629 238 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC00539-204ENST00000608957 VAX1Q5SQQ9 334 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 HCP5Q6MZN7 132 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 Q6ZPA2 131 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 TMEM185AQ8NFB2 350 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 OR5H2Q8NGV7 314 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 OR56B4Q8NH76 319 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 MRPL30Q8TCC3 161 aaKnown RBP9.42□□□□□ -0.9
LINC00539-204ENST00000608957 MED30Q96HR3 178 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 DMRTB1Q96MA1 342 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 CHIAQ9BZP6 476 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 C19orf12Q9NSK7 152 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 SLC2A8Q9NY64 477 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 NUBP2Q9Y5Y2 271 aa9.42□□□□□ -0.9
LINC00539-204ENST00000608957 hCG_2014768A0A024R1R8 64 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 IGKV1D-8A0A087WSZ0 117 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 A0A1W2PRD5 423 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 A0A1W2PRF3 423 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 A0A1W2PRM7 423 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 TMEM82A0PJX8 343 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 ZNF737O75373 536 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 PMP2P02689 132 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 CSN2P05814 226 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 ZNF735P0CB33 412 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 OMGP23515 440 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 OR3A1P47881 315 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 RELBQ01201 579 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 ZNF497Q6ZNH5 498 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 Q6ZS49 121 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 MOB1BQ7L9L4 216 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 GAPTQ8N292 157 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 ASCC1Q8N9N2 400 aaKnown RBP9.41□□□□□ -0.9
LINC00539-204ENST00000608957 OR51S1Q8NGJ8 323 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 PPP1R35Q8TAP8 253 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 PLPPR1Q8TBJ4 325 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 CREB3L1Q96BA8 519 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 PRRT1Q99946 306 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 C20orf85Q9H1P6 137 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 UNKLQ9H9P5 680 aaKnown RBP9.41□□□□□ -0.9
LINC00539-204ENST00000608957 Q9N2K0 584 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 ANXA10Q9UJ72 324 aa9.41□□□□□ -0.9
LINC00539-204ENST00000608957 TMEM30CPA0ZSE6 113 aa9.4□□□□□ -0.9
LINC00539-204ENST00000608957 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.9
LINC00539-204ENST00000608957 IGHV4-59P01825 116 aa9.4□□□□□ -0.9
LINC00539-204ENST00000608957 TCRBP04435 133 aa9.4□□□□□ -0.9
LINC00539-204ENST00000608957 IFNA6P05013 189 aa9.4□□□□□ -0.9
LINC00539-204ENST00000608957 MDKP21741 143 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms