RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 GINS4Q9BRT9 223 aa13.59□□□□□ -0.23
PMF1-206ENST00000606952 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
PMF1-206ENST00000606952 GFOD1Q9NXC2 390 aa13.59□□□□□ -0.23
PMF1-206ENST00000606952 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
PMF1-206ENST00000606952 OR2W1Q9Y3N9 320 aa13.59□□□□□ -0.23
PMF1-206ENST00000606952 IGHV4-61A0A0C4DH41 118 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 BET1O15155 118 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 KRTAP1-3Q8IUG1 177 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 FAM185AQ8N0U4 392 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 KIR3DL3Q8N743 410 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 SCGB3A2Q96PL1 93 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 ALX4Q9H161 411 aaPredicted RBP13.58□□□□□ -0.24
PMF1-206ENST00000606952 MMP28Q9H239 520 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 NUDT15Q9NV35 164 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 IDI2-AS1Q9NZ38 188 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 GPR132Q9UNW8 380 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 POLQO75417 2590 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 ABCA2Q9BZC7 2435 aa13.58□□□□□ -0.24
PMF1-206ENST00000606952 A0A087X0M5 115 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 A0A1B0GX30 115 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 A0A1W2PPH5 198 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 FOXH1O75593 365 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 AADACP22760 399 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 NFYAP23511 347 aaPredicted RBP13.57□□□□□ -0.24
PMF1-206ENST00000606952 MSMO1Q15800 293 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 IL1F10Q8WWZ1 152 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 ZNF486Q96H40 463 aaPredicted RBP13.57□□□□□ -0.24
PMF1-206ENST00000606952 NARFLQ9H6Q4 476 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 RDH8Q9NYR8 311 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 ZNF69Q9UC07 566 aa13.57□□□□□ -0.24
PMF1-206ENST00000606952 LOC105371242A0A075B767 164 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 PPIAL4CA0A0B4J2A2 164 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 M0R1W7 72 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 RGS11O94810 467 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 LIPFP07098 398 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 H2AFB2P0C5Z0 115 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 PPIAL4GP0DN37 164 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 CCL3L1P16619 93 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
PMF1-206ENST00000606952 GNMTQ14749 295 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 MORN2Q502X0 79 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 C1orf122Q6ZSJ8 110 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 PRR18Q8N4B5 295 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 C8orf31Q8N9H6 132 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 OR52L2PQ8NGH6 319 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 RFESDQ8TAC1 157 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 OR2S2Q9NQN1 319 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 VSIG4Q9Y279 399 aa13.56□□□□□ -0.24
PMF1-206ENST00000606952 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
PMF1-206ENST00000606952 INMT-MINDY4F8WBC2 141 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 PHF1O43189 567 aaPredicted RBP13.55□□□□□ -0.24
PMF1-206ENST00000606952 HSPA12AO43301 675 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 ENSAO43768 121 aaKnown RBP13.55□□□□□ -0.24
PMF1-206ENST00000606952 PRAF2O60831 178 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 PEX14O75381 377 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 CTSDP07339 412 aaPredicted RBP13.55□□□□□ -0.24
PMF1-206ENST00000606952 CD34P28906 385 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 CEACAM6P40199 344 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
PMF1-206ENST00000606952 HERV-K104P61576 105 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 Q5PR19 223 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 LPCAT3Q6P1A2 487 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 FAHD2BQ6P2I3 314 aaPredicted RBP13.55□□□□□ -0.24
PMF1-206ENST00000606952 LDLRAD3Q86YD5 345 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 ZNF596Q8TC21 504 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 MARCH1Q8TCQ1 289 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 EDARADDQ8WWZ3 215 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 FAHD2AQ96GK7 314 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 RSRP1Q9BUV0 290 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 C5orf66Q9H5L9 145 aa13.55□□□□□ -0.24
PMF1-206ENST00000606952 YLPM1P49750 1951 aaKnown RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 IGKV1D-13A0A0B4J2D9 117 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 IGHV2-70DA0A0C4DH43 119 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 MEX3AA1L020 520 aaKnown RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 C7orf66A4D0T2 115 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 FAM172BPA6NC97 362 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 ARPC1BO15143 372 aaKnown RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 MMP23AO75900 390 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 IL5P05113 134 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 IGHV1-8P0DP01 117 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 IGKV1-13P0DP09 117 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 USF1P22415 310 aaPredicted RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 PPP1CCP36873 323 aaKnown RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 LUMP51884 338 aaPredicted RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 RND3P61587 244 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 DHODHQ02127 395 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 LOXL1Q08397 574 aaPredicted RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 SLC25A42Q86VD7 318 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 SLC38A6Q8IZM9 456 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 OR10V1Q8NGI7 309 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 ZFAND1Q8TCF1 268 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 FOXC2Q99958 501 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 AGMATQ9BSE5 352 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 RTBDNQ9BSG5 229 aaPredicted RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 TMPRSS13Q9BYE2 586 aa13.54□□□□□ -0.24
PMF1-206ENST00000606952 PARP12Q9H0J9 701 aaKnown RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 UNKLQ9H9P5 680 aaKnown RBP13.54□□□□□ -0.24
PMF1-206ENST00000606952 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms