RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 DNAJB11Q9UBS4 358 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.38□□□□□ -0.27
CTSA-214ENST00000606788 IGSF23A1L1A6 192 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 C12orf77C9JDV5 145 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 CHST1O43916 411 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 F2RP25116 425 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 TMEM267Q0VDI3 215 aaPredicted RBP13.38□□□□□ -0.27
CTSA-214ENST00000606788 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 MOGAT3Q86VF5 341 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 H1FOOQ8IZA3 346 aaPredicted RBP13.38□□□□□ -0.27
CTSA-214ENST00000606788 ZNRF1Q8ND25 227 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 PHYHIPLQ96FC7 376 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 SLC25A15Q9Y619 301 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 YLPM1P49750 1951 aaKnown RBP13.38□□□□□ -0.27
CTSA-214ENST00000606788 HOXD4P09016 255 aaPredicted RBP13.37□□□□□ -0.27
CTSA-214ENST00000606788 VAMP2P63027 116 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 RUNX1Q01196 453 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 TMEM182Q6ZP80 229 aaPredicted RBP13.37□□□□□ -0.27
CTSA-214ENST00000606788 LEAP2Q969E1 77 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 ABHD14AQ9BUJ0 271 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 LPAR3Q9UBY5 353 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 TMED3Q9Y3Q3 217 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 A0A1B0GW55 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L2P0CJ85 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L3P0CJ86 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L4P0CJ87 422 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L5P0CJ88 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L6P0CJ89 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L7P0CJ90 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
CTSA-214ENST00000606788 MST1LQ2TV78 715 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4L9Q6RFH8 374 aaPredicted RBP13.37□□□□□ -0.27
CTSA-214ENST00000606788 BEND4Q6ZU67 534 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 OR2D2Q9H210 308 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DCAF16Q9NXF7 216 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 DUX4Q9UBX2 424 aa13.37□□□□□ -0.27
CTSA-214ENST00000606788 FAM74A7A6NL05 159 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 NBL1P41271 181 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 EDDM3BP56851 147 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 FAM74A3Q4VXF1 159 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 WFDC8Q8IUA0 241 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 OR13A1Q8NGR1 328 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 GPR146Q96CH1 333 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 MUCL1Q96DR8 90 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 COQ2Q96H96 371 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 OR2V2Q96R30 315 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 CXXC4Q9H2H0 198 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 CACNG5Q9UF02 275 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 RAMP3O60896 148 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 CDS2O95674 445 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 CRYAAP02489 173 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 CD80P33681 288 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 EWSR1Q01844 656 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTSA-214ENST00000606788 SWI5Q1ZZU3 235 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 KRBOX4Q5JUW0 171 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 C1orf185Q5T7R7 199 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 ACP7Q6ZNF0 438 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 TSNAXQ99598 290 aaKnown RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 RALYQ9UKM9 306 aaKnown RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 A0A1W2PPE3 182 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 MBD3L4A6NDZ8 208 aaPredicted RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 MBD3L3A6NE82 208 aaPredicted RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 MBD3L5A6NJ08 208 aaPredicted RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 F8W036 122 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 MKRN2OSH3BPM6 223 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 KRASP01116 189 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 IGLV2-14P01704 120 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 HBZP02008 142 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 ADCYAP1P18509 176 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 BLOC1S1P78537 153 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 TAGLNQ01995 201 aaKnown RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 UTF1Q5T230 341 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 CCDC36Q8IYA8 594 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 OR2C3Q8N628 320 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 MBD3L2Q8NHZ7 208 aaPredicted RBP13.36□□□□□ -0.27
CTSA-214ENST00000606788 ARL11Q969Q4 196 aa13.36□□□□□ -0.27
CTSA-214ENST00000606788 ST8SIA5O15466 376 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 IGKV1-39P01597 117 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 IGKV1D-39P04432 117 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 ZNF146Q15072 292 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 DRAM1Q8N682 238 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 OR5C1Q8NGR4 320 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 KCNIP1Q9NZI2 227 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 CTXN2P0C2S0 81 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 MUC1P15941 1255 aaPredicted RBP13.35□□□□□ -0.27
CTSA-214ENST00000606788 AKR1C3P42330 323 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 CD177Q8N6Q3 437 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 TMEM171Q8WVE6 324 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
CTSA-214ENST00000606788 POMT1Q9Y6A1 747 aa13.35□□□□□ -0.27
CTSA-214ENST00000606788 FGF16O43320 207 aa13.34□□□□□ -0.27
CTSA-214ENST00000606788 TXNL1O43396 289 aa13.34□□□□□ -0.27
CTSA-214ENST00000606788 P2RY6Q15077 328 aa13.34□□□□□ -0.27
CTSA-214ENST00000606788 FGFRL1Q8N441 504 aa13.34□□□□□ -0.27
CTSA-214ENST00000606788 LRTM2Q8N967 370 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms