RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 C1QTNF9BB2RNN3 333 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 BMP5P22003 454 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 CDKN1AP38936 164 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 DAZAP2Q15038 168 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 OR10V1Q8NGI7 309 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
CDCA3-212ENST00000604599 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 TMEM106BQ9NUM4 274 aa10.64□□□□□ -0.71
CDCA3-212ENST00000604599 EML6Q6ZMW3 1958 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 KIAA1324LA8MWY0 1029 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-212ENST00000604599 H0Y980 276 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 TMEM250H0YL14 139 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 TNFSF13O75888 250 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 SERPINE2P07093 398 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 PSG2P11465 335 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 DEFA4P12838 97 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 EGR1P18146 543 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 SRP14P37108 136 aaKnown RBP10.63□□□□□ -0.71
CDCA3-212ENST00000604599 ARL4DP49703 201 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
CDCA3-212ENST00000604599 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 Q6ZSR3 168 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 ABCA7Q8IZY2 2146 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 VN1R17PQ8TDU5 208 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 IGFLR1Q9H665 355 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 METTL7AQ9H8H3 244 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 IL23AQ9NPF7 189 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 SYNGR2O43760 224 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 PGLYRP1O75594 196 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-212ENST00000604599 TRAPPC6AO75865 159 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 UMODP07911 640 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 TPTE2P1Q5T6R2 138 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 OR8G2PQ6IF36 304 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 ASCL4Q6XD76 172 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 ADPRHL1Q8NDY3 354 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 OR10G3Q8NGC4 313 aa10.63□□□□□ -0.71
CDCA3-212ENST00000604599 PINX1Q96BK5 328 aaKnown RBP10.63□□□□□ -0.71
CDCA3-212ENST00000604599 PATZ1Q9HBE1 687 aaKnown RBP10.63□□□□□ -0.71
CDCA3-212ENST00000604599 AQP7P3A6NL99 342 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 RAB7AP51149 207 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 PPP1CBP62140 327 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 HBG1P69891 147 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 HBG2P69892 147 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 FAM69BQ5VUD6 431 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 PLCXD3Q63HM9 321 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 PIGCQ92535 297 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 TAF15Q92804 592 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDCA3-212ENST00000604599 HLA-CQ95604 372 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 FOXJ2Q9P0K8 574 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 PAGE4O60829 102 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 PATE4P0C8F1 98 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 F2RP25116 425 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 ADMP35318 185 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 ESPL1Q14674 2120 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 TMEM183BQ1AE95 376 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 ZNF611Q8N823 705 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 REPIN1Q9BWE0 567 aaKnown RBP10.62□□□□□ -0.71
CDCA3-212ENST00000604599 PXMP4Q9Y6I8 212 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 SDK2Q58EX2 2172 aa10.62□□□□□ -0.71
CDCA3-212ENST00000604599 IGKV1-6A0A0C4DH72 117 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 DHHO43323 396 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 YPEL1O60688 119 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 FASLGP48023 281 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 RPP30P78346 268 aaKnown RBP10.61□□□□□ -0.71
CDCA3-212ENST00000604599 PMP22Q01453 160 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 TEX43Q6ZNM6 134 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
CDCA3-212ENST00000604599 ZDHHC23Q8IYP9 409 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 WDYHV1Q96HA8 205 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 TRBV11-1A0A0K0K1C0 115 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 PGPEP1LA6NFU8 196 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 DRD1P21728 446 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 CHRNB4P30926 498 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 LCN2P80188 198 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 COL5A1-AS1Q5SY13 56 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 NUFIP2Q7Z417 695 aaKnown RBP10.61□□□□□ -0.71
CDCA3-212ENST00000604599 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
CDCA3-212ENST00000604599 LMX1AQ8TE12 382 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 YLPM1P49750 1951 aaKnown RBP10.61□□□□□ -0.71
CDCA3-212ENST00000604599 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 ACSF3Q4G176 576 aaPredicted RBP10.61□□□□□ -0.71
CDCA3-212ENST00000604599 C1orf53Q5VUE5 145 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 FBXW9Q5XUX1 488 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 IMMP2LQ96T52 175 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 ULBP2Q9BZM5 246 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 IL36RNQ9UBH0 155 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 ZFP30Q9Y2G7 519 aa10.61□□□□□ -0.71
CDCA3-212ENST00000604599 CRYAAP02489 173 aa10.6□□□□□ -0.71
CDCA3-212ENST00000604599 GABRG2P18507 467 aa10.6□□□□□ -0.71
CDCA3-212ENST00000604599 MPLP40238 635 aa10.6□□□□□ -0.71
CDCA3-212ENST00000604599 TMEM9BQ9NQ34 198 aa10.6□□□□□ -0.71
CDCA3-212ENST00000604599 CABIN1Q9Y6J0 2220 aa10.6□□□□□ -0.71
CDCA3-212ENST00000604599 TUSC2O75896 110 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms